Solanum stenotomum: 125855646
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Entry
125855646 CDS
T08385
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
sstn
Solanum stenotomum
Pathway
sstn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125855646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125855646
Membrane trafficking [BR:
sstn04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
125855646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
NACHT
AAA_22
NPHP3_N
IstB_IS21
AAA_5
RuvB_N
RNA_helicase
AAA_25
AAA_14
Bac_DnaA
nSTAND3
AAA_29
AAA_7
ABC_tran
AAA_lid_PRS2_C
AAA_11
Sigma54_activat
DUF815
Motif
Other DBs
NCBI-GeneID:
125855646
NCBI-ProteinID:
XP_049391360
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All DBs
Position
2:13150402..13183913
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AA seq
1128 aa
AA seq
DB search
MELEVRVVAGIESCFVSLPVTLLQTLESTTASGYLPPVLALELRSGNNLWRLAWSGSASS
NPFPNSIQIAKQYAECIGLSDRTVVQVKVVSNLPKATMVTIEPDTEDDWEVLELNAEHAE
QAILKQVAIVYGAMRFPLWLHGQTIITFKVVSTFPLTPVVQLVPGTEVAVAPKRRKRNIS
SGEESMMQDDELSVSKALLRVQDTDDQCIHKYEADGVEMRVVLTSAIFIHPETASIYSFE
PLQTVVIIPRLLPRETKKNHETDSRTGKSSVTLKEGNVGVLPDKHNIHQAMARLIFSESV
AKGHIMLPRSIRLYLRAELHSCVYVKRFNVKLKKEIPLVSLSPCEFKIFQETGVSEENSS
EALGKNNYNKTLTTLFRTNSDIEMGTSDWSIHEKIAAAFSCESSKEDKETSIKSDLKKDI
AAILHRWCLAQLHAVTIKAGVEVKSLILGNTTLLHFKAKDSRSIKHGGQTMNGGETSLDA
MYVLSTTDDSLRDETIDAYEVAFDEGSKLTTNPKSFEPWLGKLQLGNGLSIRTVREKLFA
KSTSLTTSSLDWMGTAAPDVINRLVVLLSSSSWMLSSAYDFPLPGHILIHGPSGSGKTLL
ATVAAKFAEESEDILAHIIFLSCSKLALEKPSAIRQTLLSYVADALDHAPSVVVFDDLDS
IVAASSESEASQPSSSSAVLAEYFADIMDEYEEKRRNTCGIGPVAFIACAQSLTNLPQNL
TSSGRFDFHVKLSAPATTERGALLKHIIQKRSLQCSDDTLLDIASKCDGYDAYDLEILVD
RSVHAATARFLSSDLAVGSQEKPVLFKDDFLRAMHEFVPVAMRDITKPAADGGRSGWEDV
GGLNDIRNAIIEMIELPSKFPNIFAQAPLRMRSNVLLYGPPGCGKTHLVGAAAAACSLRF
ISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVN
QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSQHERLEILSVLSR
KLPLASDVDLDVLARLTEGFSGADLQALLSDAQLEAVHDLLDSENAGKPDKKPVISDALL
KSIASKAKSSVSDAEKQRLYDIYSQFLDSKRSVAAQSRDAKGKRATLA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggagttggaggtgagagttgtcgccggaattgagagctgctttgtatcgctaccagtg
acattactccagactctcgaatccaccactgcttccggttaccttcctcctgttctagcc
ctcgaactccgctccggcaacaatctctggcgcctagcttggtccggttccgcttcatcc
aatccatttcctaattcaattcagattgcgaagcaatatgcggagtgtattggattgtcg
gatcgtactgtagttcaagtaaaagtagtgtccaatttgcctaaagctactatggttacc
atagagccagatactgaagatgattgggaagttttggagcttaatgctgagcatgcagag
caagctatcttaaagcaggttgcgattgtctatggagcaatgcgatttcctttgtggctg
catgggcaaacaattatcacattcaaagttgtttcaacctttccgctgacaccggtagta
caacttgtccctggaactgaagttgctgttgctccaaaaaggcgcaaaagaaatattagt
tcgggtgaggaatccatgatgcaagacgatgagctttcagtctcaaaggcactattgaga
gtccaagatactgatgatcaatgtattcacaaatacgaggctgatggagtcgagatgaga
gtggttttgacttctgctatcttcattcatcctgagacggccagtatatactcttttgaa
cctcttcagactgtggtaataattcccagattgcttcccagagaaaccaagaagaaccat
gagacagatagccgtacagggaaaagtagtgtaactttaaaggaaggcaatgtaggagtt
ctacctgacaagcacaatatccatcaagcaatggctcgtctaatattttcagaatcagtg
gctaaaggacatatcatgcttcctcggtctattcggctttatttgagagcagagttacac
tcatgtgtatatgtgaagagattcaatgtcaagttgaagaaagagattcctctagtttcg
ctttcaccttgtgaattcaagatattccaggagactggggtttctgaagaaaatagttct
gaggctttgggcaagaataattataataaaacattaacaacacttttcagaaccaattca
gacattgagatgggtactagtgattggtcaatccatgagaaaattgccgcagccttttct
tgtgaatctagcaaggaagacaaagaaacgagcatcaagtctgatctcaaaaaggatatt
gcagctattttgcatagatggtgccttgcacaactacatgctgtcacgatcaaggccgga
gtggaagtgaaatcgttgattttagggaacacaactttgcttcacttcaaagcgaaagac
agcagatccataaaacatggtggccaaacaatgaatggtggagaaacatcactagatgcc
atgtatgtgttgtcaactactgatgactcattacgtgatgaaacgattgatgcttatgaa
gttgcattcgatgaaggaagcaagttgactaccaacccaaaaagcttcgaaccttggctt
ggaaagcttcaactgggcaacggtctttccattaggactgtcagagagaaattatttgct
aaaagcaccagtcttacaacttcttcattagactggatggggacagctgcacctgatgtg
attaataggttggtagtattgttatcttcttcatcttggatgttgtccagtgcttatgat
tttccgctgccaggacatatcctaatccatggtccttctggttcggggaaaacattatta
gctacagttgctgctaaatttgctgaagaaagtgaggacatcttggcccatataatattc
ttatcttgttctaagcttgctttggaaaagccttcagccattcgtcaaactttattgagc
tatgttgctgatgctttggatcatgcaccttctgttgtggtgtttgatgatcttgatagc
attgtggcagcttcctctgaatctgaggcttctcaaccttcatcctcatcagcagtgctt
gcagaatattttgctgatattatggatgaatatgaggaaaagcggaggaacacgtgtggg
attggcccagttgcatttattgcttgtgcacagtctctgactaatttaccacagaacttg
acctcttctgggaggtttgactttcatgttaaattgtctgcacctgctaccacagagcgt
ggtgccttgctaaaacatatcattcagaagcgttctttgcaatgttctgatgacaccttg
ctggatatagcctccaagtgtgatggatatgacgcatatgatctggaaatactggttgat
aggtctgttcatgctgcaactgcccggtttttgtctagtgatttggctgttggcagtcag
gaaaaacctgttttgtttaaggatgatttcctgcgtgccatgcatgagtttgttccagtg
gctatgcgtgacatcactaaacctgctgctgatggtggccggtctggctgggaggatgtt
ggaggtcttaatgacatccggaatgctattatagagatgattgagttgccgtccaaattt
ccaaatatatttgcacaagctcctctaaggatgcggtctaatgttctgttatatggcccc
cctggttgtggcaaaacacaccttgttggtgctgcagctgctgcatgctcactaagattt
atctcagtcaaaggtcctgaactgctgaataaatacatcggtgcttctgagcaagcagtt
cgagatatattctcaaaagcagctgcagcagcaccatgccttcttttttttgatgaattt
gattctatcgcaccaaagagaggccatgacaacactggtgtcactgatagagttgttaat
cagtttctcacggaattggatggtgttgaagtgttaacgggtgtgtttgtatttgctgcc
acaagtagacctgatttgcttgatgctgcacttttgcgacctggaaggctggatcggctt
ctcttctgtgattttccttcacagcatgaaaggttggagattctttcagttctatcaaga
aaattaccactggcaagtgatgtcgatttggatgtcttagctcgtttgacagaaggattc
agtggagctgacctccaagctcttctctctgatgcacagcttgaggctgtccatgatctt
ctagatagtgagaatgcggggaagcctgataagaagccggtcatctctgatgctcttctg
aaatcaattgcatccaaggcaaaatcatctgtttctgatgctgaaaagcagcgattatat
gatatctacagtcagtttttggattcaaaacgatcagtggctgcacagtcaagagatgca
aaaggcaaaagagcaacccttgcttaa
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integrated database retrieval system
