Solanum stenotomum: 125856486
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Entry
125856486 CDS
T08385
Name
(RefSeq) cyclin-H1-1-like
KO
K06634
cyclin H
Organism
sstn
Solanum stenotomum
Pathway
sstn03022
Basal transcription factors
sstn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125856486
09124 Replication and repair
03420 Nucleotide excision repair
125856486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125856486
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125856486
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125856486
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125856486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
HEPN_RnaseLS
Motif
Other DBs
NCBI-GeneID:
125856486
NCBI-ProteinID:
XP_049392000
LinkDB
All DBs
Position
2:complement(8944337..8950659)
Genome browser
AA seq
356 aa
AA seq
DB search
MADFVTSTHKTKWIFTPQDIKHKYKVANHRAKQALEKYGTTRMEVDIDGSFSYAESQNDA
KDSAEKRPKPLKVEEEQLLRAFYEFKIQDVCDAFKFPRKIQATALIYFKRFYLQWSVMEH
HPKDIMLTCIYAACKAEENHVSAEELGKGIGQDHHVILNNEMLVFQAWILFDGHVILQFP
SNLCLINFFLTFILQSLGFDLIVYAPYRALEGFISDLEEFCGAKDEDQLVALKGSLDTAR
IEADKIMRSDGPLLFPPGQLALTALHRANAAHSIFDFERYLRSVLSHYQPAHAISELTGS
INAIDSLVGKLLTPTSKDVKHVDRKLKSCLDPGSHDKSKKRKHRSKDGSQEATDIS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcgtgacatctactcataaaaccaagtggatttttactccccaagatatt
aaacataagtataaagttgctaatcacagagcgaaacaagcactagagaagtatggaaca
acgcgaatggaagttgatattgatgggtcattctcatatgctgaaagtcaaaatgacgca
aaagatagtgcggaaaagcgtcctaaaccactcaaggttgaagaagaacaacttctaagg
gctttctacgagttcaaaattcaagacgtctgtgatgcgtttaagttcccacgtaagatt
caggcgacagctctcatttattttaagaggttttatctacaatggtccgtgatggaacat
caccctaaagacattatgttaacctgcatatatgcagcttgcaaggcagaggaaaaccat
gtatcagctgaggagcttgggaagggtattggacaggatcatcatgtaatcctcaacaat
gagatgctggttttccaggcatggattttatttgatggtcatgtcattctacaatttcct
tcaaatctttgcttaatcaacttttttctaacctttattttgcagagtcttggatttgat
ctaattgtttatgctccatatcgtgctcttgaaggttttatcagtgatttagaggagttc
tgtggagctaaagatgaagaccagcttgtggcactgaagggttcacttgatactgctagg
attgaagcagataagattatgcgttctgatggaccacttctattcccacctgggcagttg
gcattgacagctttgcatagagctaacgcagcgcatagcatatttgattttgagaggtac
ctaagaagtgtcctatcacattatcagccagctcatgccatttcagaacttactggttct
ataaatgccattgattctttggttggcaaacttttgactccgacttccaaagatgtgaag
cacgttgatcggaaactcaaatcatgtcttgatccgggttcacatgacaagagtaaaaaa
aggaagcatagatccaaagatggctcacaggaggctacagacatatcttga
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