Solanum stenotomum: 125856516
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Entry
125856516 CDS
T08385
Name
(RefSeq) protein GIGANTEA-like
KO
K12124
GIGANTEA
Organism
sstn
Solanum stenotomum
Pathway
sstn04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125856516
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NCBI-GeneID:
125856516
NCBI-ProteinID:
XP_049392034
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Position
2:10309898..10345076
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AA seq
1167 aa
AA seq
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MAATCERWIDGLQYSSIFWPPPQDAQQRKAQITAYVEYFGQFTSEQFPEDIAELIRNRYP
SKENRLFDDVLATFVLHHPEHGHTVILPIISCIIDGTLDYDKSCPPFTSFISLVCPSSEK
EYSEQWALACGEILRILTHYNRPIYKVVQQGGEADRSSRGIHASTSKSADSEPSMPSEHH
ERKTLRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGELKPPSTASSRGSGKHPQL
IPSTPRWAVANGAGVILSVCDEEVARYETATLTAAAVPALLLPPPTTPMDEHLVAGLPAL
EPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYTSGLRL
PRNWMHLHFLRAIGIAMSMRAGIAADAAAALLFRVLSQPALLFPPLRQVEGIEVQHEPLG
GGYISCDKKQRQVPLAEATVEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSAV
DLPEIIVATPLQPPVLSWNLYIPLLKVLEYLPRGSPSETCLMKIFVATVEAILQRTFPSE
SSRDEIRRNRYNMFGSASKNLAVAELRTMVHSLFLESCASVELASRLLFVVLTVCVTHEA
KTNGSRKPVGEDPHHPSEMGSDSLEAGGKQKEKNPKKVKKQGPVSAFDSYVLAAVCALSC
ELQLFPLLSRGSNYSDPKSILVAAKHANDSSMEFKNGIHSAVCHTRRILTILEALFSLKP
SSIGTSWSYSSNEIVAAAMVAAHISDLFRHSKACMHALSALIRCKWDNEILSRASSLYNL
IDIHSKVVASIVDKAEPLEAHLIPVPVKKRSSCLNGKKHNKYSNCTCLTAEQSSLLECKH
STDCKTLTMSEKVLHSSEAAQYTSGKGIASFPLDASDLANFLTMDRHIGFNCNAEDLIKS
VLAENEKLCFSVVSLLWHKLIASPEIQPSEESTSAQQGWRQVIDALCNVVSALPSKAATA
IVLQADKELQPWIAKDDDLGQKMWRINQRIVKLIAEVMRNHDTPESLVILASAPDLLLRA
TDGMLVDGEACTLPQLELLEVTARAVQPVLEWGESGLAIVDGLSNLLKCRLPATVRCISH
PSAIVRALSISLLRAIMHTGSIKTRAKRADVNGIHGPAYKYLNMGTINWQRDIEKCLTWE
ANSRIENGMCTEFLDMAAKELGCTISI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggccgctacatgcgagaggtggattgatggccttcaatactcctcaatattttggcct
ccccctcaagatgcacaacaacggaaggctcaaattactgcctatgttgagtactttggt
cagttcacatcagaacaatttcctgaagatatagctgagctgatacggaaccggtatcca
tccaaggaaaaccgactttttgatgatgttttagcgacttttgttcttcaccacccagag
catgggcatactgtaattcttccaattatttcatgcatcatcgatggcacactggactat
gataaaagttgtccacctttcacttcttttatatcattggtttgcccaagcagtgagaag
gaatattcagaacagtgggctcttgcatgtggagagattctacgaattttgacacattac
aaccgtccgatctacaaagttgtgcaacagggtggcgaagcagacagaagcagccgagga
atccatgcttcaacaagtaaatctgctgatagtgaacctagtatgccttcagagcatcat
gagaggaaaacgctgaggccgttgtctccatggattactgatatactgctcgccgcacct
ctaggtattagaagtgattacttccgttggtgtggtggtgttatgggaaagtatgctgct
ggagaactaaagccaccatcaactgcttcttctcgtggctctggaaagcatcctcagtta
atcccttcaactccgaggtgggcagttgccaatggtgctggtgttattttaagtgtttgt
gatgaagaagttgctcgttatgagactgctaccttgactgcagctgccgttcctgctctt
ctgcttccacctcctacaacacctatggatgagcatcttgttgcagggctaccagcactt
gagccgtatgcacgattgtttcatcgatactatgcaattgctactccaagtgccacccag
aggcttcttcttggacttctagaagctccaccatcctgggctccagatgcacttgatgct
gctgttcagctagtggaacttcttcgagcagctgaagattatacttctggcttgcggctt
cctaggaattggatgcatttgcatttcttgcgtgcaattggaattgccatgtccatgaga
gcaggcattgctgcagatgctgcagctgctttacttttccgagtactttcacagcctgct
ctgctctttcctccattaaggcaagttgaaggaattgaagttcaacacgaaccactgggt
ggcggctatatttcatgcgataaaaagcagagacaagtgcctttagcagaagccacagtt
gaagccactgcgcaagggattgcatcaatgctttgtgcacatggccctgaggttgaatgg
agaatatgtaccatatgggaagctgcttatggcttgattcctttgagttcatcagctgtt
gatctacctgaaattatagttgccacccctctgcaaccacctgttttatcatggaacctg
tatataccactactaaaggttcttgagtatcttcctcgtgggagtccatctgaaacttgc
ctcatgaaaatatttgtggcaacggtagaagcaattcttcagagaacattcccatctgag
tcctctagagatgaaatcagaagaaacagatacaacatgtttggatctgcctccaaaaac
cttgctgtggcagaattgcgaacaatggttcattcattgttcttggagtcgtgtgcttct
gtagagcttgcttctcggcttctttttgttgtattaactgtatgtgtcacccatgaagca
aaaacaaatgggagcagaaaacctgtaggtgaagatcctcaccatcctagtgaaatgggt
tcagactcgctggaagctggtggaaagcagaaagaaaaaaatcccaagaaagtgaaaaaa
caaggacctgtttcagcatttgattcttatgttcttgctgctgtctgtgctctttcatgt
gaacttcaactctttcctttgctttcaagagggagtaattattcggatccaaaatccatc
ctggttgctgcaaagcatgcaaatgattcgtctatggagtttaaaaatgggattcattct
gctgtctgtcacactcggaggatattgacaattctggaggctcttttctctttgaaacca
tcatctataggaacttcatggagctacagctcaaatgagatagttgctgcagctatggta
gctgctcatatttctgatctgtttagacactccaaggcttgcatgcatgctctttcggcc
ttaatacggtgtaagtgggataatgaaattctctccagggcatcttcactgtataacctc
attgatatccatagtaaagttgttgcatcaattgttgacaaggccgaaccattggaagca
cacctaatacctgttcctgttaagaaaagaagctcgtgcttgaatgggaaaaaacataat
aaatatagcaattgcacctgcttaactgcagaacagtcatcattgcttgagtgcaaacac
tcaactgattgtaaaacattaactatgagtgagaaagttttacactcaagcgaagctgca
cagtacaccagtggtaaagggatcgcaagtttccctttagatgcttcagatttggccaac
tttctgacaatggacaggcacataggattcaattgcaatgctgaagatcttataaagtcg
gtactcgcggagaatgagaaattatgtttttctgttgtctcgttgctgtggcacaagtta
attgcatcacctgaaatacaaccaagtgaagaaagcacttccgctcagcagggatggaga
caggtcattgacgcactatgcaacgtcgtatcagcattgccttcaaaagctgctacagcc
attgttcttcaggcggacaaggaattgcaaccatggattgccaaagatgatgatcttggt
cagaagatgtggaggataaaccaacgaattgtgaaattgattgcagaagtaatgaggaat
catgatacaccagaatctttggttattcttgctagtgcaccagacctcctcttacgggca
acagatgggatgcttgtagatggagaagcatgcaccttaccacagctggagctcctggaa
gtgacagctagagctgtacaaccagtgcttgagtggggagaatctggattagcaatcgtt
gatggtctgtcaaacttgttgaagtgccgcttaccggccacagttcgttgtatttctcat
ccaagtgctatcgtacgtgctctcagcatatcacttctccgtgccattatgcatactggt
tcaataaaaactagagctaaacgagctgatgtaaatggtatccatggtcctgcttataag
tacttaaacatgggcactattaactggcaaagggatatcgagaagtgtttgacgtgggaa
gctaacagccgaattgaaaatggaatgtgtacagagtttcttgatatggctgctaaggaa
ttagggtgtactatatccatttga
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