Solanum stenotomum: 125856538
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Entry
125856538 CDS
T08385
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
sstn
Solanum stenotomum
Pathway
sstn03430
Mismatch repair
sstn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125856538
03460 Fanconi anemia pathway
125856538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125856538
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125856538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
125856538
NCBI-ProteinID:
XP_049392058
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All DBs
Position
2:41291008..41335336
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AA seq
738 aa
AA seq
DB search
MEIEETIIEVEMEDEAIPAPIPKEPPKILRLEECVVNRIAAGEVIQRPVSAVKELIENSL
DADSTSISVVVKDGGLKLIQVSDDGHGICYEDLPILCERHTTSKLSKFEDLQSIRSMGFR
GEALASMTYVGHVTVTTITMGQLHGYRATYRDGLMVDEPKACAAVKGTQIMIENLFYNMA
ARRKTLQNSADDYPKIVDLISRFAIHHTHVSFSCRKHGAGRADVHTIATSSRLDAIRSVY
GVSVARNLMNIEVSDTGPLNSVFKMDGFISNSNYIAKKITMVLFMNDRLVDCGALKRAIE
IVYTATLPKASKPFIYMSIILPPEHVDVNIHPTKREVSLLNQEFVIEKIQSVVGSKLRSS
NESRTFQEQTMDFSSSSPTATSKDSIKEPSPSGIKSQKVPHKMVRTDTLDPSGRLHAYMQ
MKPPGNSERGSCLSSVRSSIRLRRNPSETADLTSIQELVNEIDNDCHPGLLDIVRNCTYT
GMADEIFALLQHNTHLYLVNVINLSKELMYQQVLRRFAHFNAIQLSEPASLPELVMLALK
EEGTDPEGNESKELRGKIAEMNTELLKQKAGMLEEYFSIHIDSNGNMSRLPVILDQYTPD
MDRIPEFILCLGNDVDWEDEKICFQTIAAALGNFYAMHPPLLRNPSGDGLKFYRKRVLSS
GSEVTSTENIENDTMEAEFEEELLLEAENAWAQREWSIQHVLFPSLRLFFKPPTSMATNG
TFVQVASLEKLYRIFERC
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaagagactattattgaagtggaaatggaagatgaagccatcccagcgccg
attccgaaggagccgccgaagattctgcggctggaggaatgtgtggtgaacagaatagcg
gctggcgaagtcatccaacggccagtctctgccgtgaaagagctcattgagaatagcctg
gatgctgattccacctctatttctgttgttgttaaggatggcggtcttaaacttatccaa
gtttccgacgatggccatggaatctgttatgaagatttgccaattttatgcgagaggcat
actacgtccaagctgagtaaatttgaagatttgcagtccattaggtcgatgggatttaga
ggagaagccttggctagcatgacatatgtgggtcacgtcactgtcaccaccattactatg
ggccagttacatggatacagggcaacatatagagatggtttgatggtggatgagccaaag
gcttgtgctgctgtcaagggtacccagataatgattgaaaatttattttataacatggct
gcgcgaaggaaaacccttcagaattctgccgatgactatccaaaaattgttgaccttatt
agtaggtttgcaattcatcacacacacgtgagcttctcttgtagaaagcatggagctggt
agagcagatgttcacactattgctacttcttcaaggcttgatgcaattagatccgtttat
ggagtttcagttgctcgaaatctgatgaatatcgaagtttctgatactggtccattaaat
tcagtttttaagatggatggtttcatctccaactctaattatattgcgaagaagataaca
atggtgctttttatgaatgatagactcgttgattgtggtgctttgaagagggcaattgaa
atagtctatactgcaacattgcctaaagcatcaaaacctttcatatacatgtcaatcatt
ttgccgcccgagcatgttgatgtgaatatacacccaacaaagagagaggtaagccttttg
aatcaagagttcgtcattgagaagatccagtctgtagtagggtcaaaattgagaagctcc
aatgagtcgaggacattccaggaacagactatggatttttcttcatccagtccaacggcc
acaagtaaagattccattaaagaaccgtctccttctgggataaagtcacaaaaagtgcca
cataaaatggtacgaacagatactttggacccttctggaaggctgcacgcttacatgcaa
atgaagcctcctggtaattcagaaagaggttcttgcttgagctctgtgaggtcttctatc
agactaaggaggaatcctagtgaaaccgcagacctcactagcatccaagagcttgttaat
gagattgataatgactgtcaccctggtctattggatattgttaggaattgcacatatact
gggatggcggatgagatttttgctttgcttcaacacaatacacacctttatcttgttaat
gtgattaacttgagtaaagagcttatgtatcagcaagttttacgtcggtttgcccatttc
aatgcaattcaactgagtgaaccagcatcattacctgagttagtaatgcttgctctgaaa
gaagagggtacagatccagaaggcaatgaaagcaaagagctaagaggaaagattgccgag
atgaatacagaactgctcaagcaaaaggctggaatgctagaggagtattttagtattcat
atcgattcaaatggcaatatgtctaggcttcctgttatactggatcagtacacacctgac
atggaccgcatcccagaatttatactttgtttaggaaatgatgttgactgggaggatgag
aaaatttgttttcagactattgctgctgccctaggaaatttttatgccatgcatcctcca
ttattgcgtaatccctcaggtgatggcttgaaattctacagaaagagagtgctttcaagt
ggttcagaagtgacttctacagaaaacatagagaatgataccatggaggctgaatttgag
gaagaattacttttggaggctgaaaatgcctgggctcaacgtgaatggtcaattcagcat
gttctgtttccctccctcaggctcttcttcaagccccctacttccatggctacaaatgga
acttttgttcaggttgcatcactggaaaagctctacagaattttcgagagatgttaa
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