Solanum stenotomum: 125856552
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Entry
125856552 CDS
T08385
Name
(RefSeq) protein NPGR1
KO
K21843
tetratricopeptide repeat protein 7
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125856552
Membrane trafficking [BR:
sstn04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
125856552
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_CcmH_CycH
TPR_2
TPR_1
TPR_19
TPR_16
ARM_TT21_C
TPR_17
TPR_11
ANAPC3
TPR_EMC2
SHPRH_helical-1st
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
125856552
NCBI-ProteinID:
XP_049392076
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All DBs
Position
2:4880584..4884198
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AA seq
706 aa
AA seq
DB search
MLCACSGEQFKFDEPPPESPESLATRDFSASGISSRNGTVDWDLKLDDAQVDEVESTLKE
ALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRTLSSRMSKAISERTRPLKPRSKGD
IVPAGVMSLHSVSLLLEAILLKAKSLEELSRIKDAAKECKMILDVVDSALPNGIPDGISE
DCKLLEMFHKALELLPKLWIQAGYLDEAVLAYRRALIKPWNLDSQRLACIQKDLATTLLF
GGVEVEVPAQFQVWGSTAPKSNLEEAILLLFVLMSRMLNGQIIWDSEVMSHLTFALTISN
NFESVADHIEQVIPGVYTRAERWYLLALCYSAAGQNDTALNLVKKISGCSEANQEPYIPS
LLLGAKLCSQDLQQAHEGINFARQVINSAKNQDEHFLVQAHKLLGVCYGNAARVSLSDFE
RNFCQREALAALNSASVCKEDPEIMFILGLENAIQRNLTPAFNNVMRYSEMSAGSTAKAW
KLLALVVSAEQRFKDAEAIVDLALDETGQIDQMEHLRLKAVLQISQQQPKQAIETYRILL
ALIQAQKESATNDVVTSQRRLEVEAWLDLAGLYTDLESWRDAEICINRAKAIQFFCPRNW
HATGVLFQAKARYKEALVAFTVSLSIEPDYIPSIVSTAKVLMKMSNDVAPIARSFLMNAL
RLEPTNHEAWFNLGMLAKMEGSVHQAADFFQAAHELKLSAPVQSFI
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtgcctgttcaggtgagcaattcaaatttgatgagccaccaccagagtctcct
gagtcattggccacaagggatttttcagctagtggtatttcttcaagaaatggaacagtt
gattgggatttaaaacttgatgatgcacaagttgatgaagttgaatcaactttaaaagag
gcactttccttgaactatgaggaagcaagagctttgttggggaggctagaatatcaaaga
gggaattttgatgctgcccttcaagtgtttcaaggaatagatattagaaccctgtcatcg
agaatgtctaaagccatttctgagagaacgaggcccttaaaaccgcgttccaaaggtgat
atcgtgcctgctggcgtaatgtcactgcattctgtgagtttacttcttgaagcaattttg
cttaaagcaaaatccttagaagagctcagccgaatcaaagatgctgctaaggagtgcaag
atgatactggatgttgtcgattcagcattaccaaatggaataccagatggaatttctgaa
gactgcaagttattggagatgtttcataaagcactcgagttacttccgaagttatggata
caagcaggatatttggatgaagctgtgcttgcatatcgaagggcactaatcaagccatgg
aatttggattcccaaagattggcctgtatacaaaaagacttagccaccactttactcttt
ggaggcgttgaagttgaggttcctgctcaatttcaagtgtggggttcaacagcccctaaa
agtaacttggaggaagcaattctcttgttgtttgtactcatgagcagaatgctaaatggt
caaataatatgggattctgaagtcatgagccatttgacattcgcgctgacaatttctaac
aactttgagtctgttgcagatcatattgagcaggttattcccggagtttatacccgagca
gagaggtggtatctacttgctctttgttacagtgctgcaggtcagaatgatacggcattg
aaccttgtcaagaaaatttctggatgttcggaagccaaccaagaaccttatattccatct
ctcttgttgggagcaaagctgtgttctcaggatctgcaacaagctcacgaggggataaat
tttgctcgtcaagtaattaactcggccaaaaatcaagacgaacatttcctagttcaagct
cataaacttcttggcgtctgttatggaaatgctgcaagagtttccctttcggattttgaa
agaaatttctgccaaagagaagcattagctgccttaaactcagcttcagtttgcaaggag
gatccagaaattatgtttattcttggattagaaaatgccatccaaagaaacttgactcca
gcttttaataatgtaatgcgctactcagaaatgtcggctggaagtacagcgaaagcttgg
aagttgttggctttagtcgtttctgcagaacagagattcaaagatgctgaagccatagtt
gatcttgctctcgatgagactggacaaatcgaccaaatggaacatctcagattaaaagct
gtccttcaaatatctcaacaacagcccaagcaagccatagagacatacaggattctgctt
gctttgattcaagcacaaaaggagtccgcgacaaatgatgtggtaacttctcagagaaga
ttagaagttgaagcatggcttgatttagcaggattatatacagatcttgagtcgtggcgt
gacgctgaaatatgtataaacagagccaaagcaattcaatttttctgcccgcggaattgg
catgcaacaggtgtattatttcaagctaaagcaagatataaggaagctcttgttgccttc
acagtttctctatcaatagaaccagattatatccccagcattgtttctacagctaaagtc
cttatgaagatgagtaacgacgtagcccctattgctagaagctttttaatgaatgctcta
cgattagaaccaacgaaccatgaagcgtggtttaaccttggaatgcttgcaaagatggaa
ggatcagtccatcaagcagcagattttttccaagctgcacacgagttaaagctttctgca
ccagttcaaagttttatctga
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