Solanum stenotomum: 125856559
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Entry
125856559 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase ATL15-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125856559
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125856559
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125856559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
Arc
Prok-RING_4
zf-Nse
RINGv
Baculo_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
125856559
NCBI-ProteinID:
XP_049392088
LinkDB
All DBs
Position
2:complement(7460285..7461587)
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AA seq
390 aa
AA seq
DB search
MKMIVQLSHGFCVIFLCFFLLVMRVISQSEITPSPPPFSFDTKIKINPPTAIILVTLISV
FFAMGIVSVYVRQCADRRFASDFEFADEDSGRRGARSHGLDPVIITSFPMFYYSDVKDHK
IGKSALECAICLNEFEDVETLRLLPKCSHVFHPNCIDAWLFSHITCPVCRANLLPDPGDF
EKTATPGYYSNSGSPDPEFGNSVHEVNIDINNIASPEVINIAQTPVHNRPPRANSKITGK
FPRSHSTGHSLVRPGEDRERFTLRLPEEVREKLINSGSSRAQTNSLFPSERSMPKGYRSS
SVGTGSTRINHENYERFNEEGRWGFTTVPPFFSRGGSTRSSKDGNGAGDDITVVSKNLFK
SIKSPFDRIFEKNSSGERSFDKLRLGSSSN
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatcgtccagctaagccatggcttctgcgtgattttcctctgttttttcctt
ctcgtgatgcgtgttatatcgcaatcagaaataacaccatcaccacctccattttcattc
gatacgaaaataaaaatcaacccacctacagctatcattttagttacacttatcagtgtc
ttcttcgctatgggaattgtttcagtctacgtccgtcaatgcgccgatcgccgcttcgcc
agcgacttcgaatttgcagacgaagattctggacgacggggcgctcgatcgcatggacta
gacccagtcataattacctctttccctatgttttattactctgatgttaaagatcacaaa
attgggaaatcagcgttagaatgtgcgatttgcttaaacgaattcgaagatgttgaaact
cttcgacttcttcctaaatgctctcacgtttttcatccaaattgcatcgacgcttggtta
ttttctcatattacctgccctgtttgtcgtgccaatttactccctgacccgggcgatttc
gaaaaaaccgccacgccgggttactattcgaattccgggtcacctgaccccgaattcggt
aactcggtccatgaggtaaatatagatatcaacaatatcgcttcacctgaagtgataaat
attgcacaaacacctgtacataatcgtccaccaagggcaaattcgaaaattactggaaaa
tttccaaggtctcactcgacgggtcactcactggttcgacccggtgaagatcgcgagcga
tttacgttgaggttaccagaggaggttcgagagaaattgattaattcgggttcgagtcga
gcacaaaccaactcgttatttccaagtgaaagaagtatgccaaaagggtacagaagtagt
agcgtgggaaccggttcaacacgtattaatcatgaaaattatgagcggtttaatgaggaa
ggccggtgggggtttacaacggttccacctttcttttcaagaggcggttcaacccggtct
tctaaggatggtaatggagctggagatgatataacggtggtttcaaagaatttattcaag
tctattaagtcgccgtttgatcgcatatttgagaaaaatagtagtggtgaacgatcgttt
gataaacttaggttaggtagttcaagtaattga
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