Solanum stenotomum: 125856862
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Entry
125856862 CDS
T08385
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125856862
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125856862
04121 Ubiquitin system [BR:
sstn04121
]
125856862
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125856862
Peptidases and inhibitors [BR:
sstn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125856862
Membrane trafficking [BR:
sstn04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
125856862
Ubiquitin system [BR:
sstn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125856862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
125856862
NCBI-ProteinID:
XP_049392465
LinkDB
All DBs
Position
2:complement(12092018..12105416)
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AA seq
573 aa
AA seq
DB search
MNIHSSSLVHKFKHGFNSHWVTAHGVQVSVAATLLSIAGGLIFAIKDGGKIRDIMVSDKS
SSKNFYLTVPGLQNLGNNCFLNVVLQALASCKSFGKFLEQVVEECEGSSMEGSRDLPVIA
ALASLVEELCTARHGRTVLSPRRLMHAMTSHIPDFNLTSQQDAEEALSHLLSSLRAELSE
SYVHDHSSLADVITLPNCRIVTQRMKGESEQERWRQSFLGPFDGILGSFLNCQTCSFQIS
LDFQLFHSLHLVPVSSSAGAIMPGCSVEHCLKQFFVAEQLENYKCSHCWHTAAVKYVSAM
DENEAIVEKLKLCNEEDSCDCKQLACLARFPWSNSFSRTFKQLSIGRSPKVLCLHLQRAS
INVFGEQNKLQDHISFPLILDLTPFVKNGVGTKSWEENLQIGQKTHQQQPFPLFNNLNLQ
DNKEMLTCITRSERKFSTEVEDTAGLRVSDNFSVKAPKSKSSSLEAGGYKEISLNQLPPH
SGNQGETSRITHSKSHKYRLASVVHHFGKVGSGHYTVFRRVTTKIGEDNHAGLLGSAVDN
WFCISDTDVYRVSERDVLDAEATLLFYEKVSDC
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacactcatcttcacttgtacacaaattcaaacatgggtttaattcccattgg
gttactgctcatggggttcaagtttcagttgctgctactttattaagtattgctggtggt
ttgatatttgctataaaagatggtggaaaaatcagagacatcatggtatcagacaaaagt
agttcaaaaaatttttatttgacagtacctggattgcaaaatcttggtaacaattgcttt
ttgaatgttgttttacaggctttagctagctgtaagagctttggcaaatttcttgagcaa
gttgtggaggaatgtgagggttcatcaatggaaggaagtagagacttgccggttattgct
gctttggcttcgcttgttgaagaattatgtactgcgcgacatggaagaactgttctaagt
ccaaggagattgatgcatgccatgactagtcacattcctgatttcaatctaactagccag
caggatgcagaggaagcactctcccatcttttatcttctttaagagccgaactgtcagaa
tcttatgttcatgatcacagctctttggcggacgtaattacacttcctaattgtaggatt
gttacacaaaggatgaaaggagaaagtgaacaggagagatggaggcagagttttcttggg
ccttttgatgggattcttggtagttttttaaactgccaaacttgttcgtttcagatctct
ctggattttcagttgtttcatagcttgcatcttgtgccagtgtcaagcagcgctggggct
attatgcctgggtgttccgtggagcattgcctgaagcagttctttgttgcggaacaactt
gaaaactataagtgcagccactgttggcatactgctgccgtaaagtatgtctctgccatg
gatgaaaatgaggctattgttgaaaaacttaagctgtgcaatgaggaagattcatgtgat
tgcaaacagctagcgtgccttgctagatttccatggtcaaatagcttctcacgcactttc
aagcaactcagtattggccggagtcctaaggttctatgtcttcatttacaacgcgcttct
ataaatgtatttggagaacagaacaaacttcaggaccatatttcatttccattgattttg
gacttgactcctttcgtgaaaaatggagtgggaacaaagagttgggaagagaatctgcaa
attgggcaaaaaacgcatcaacagcagcctttccctttgttcaataacttaaatctgcaa
gataataaggagatgttgacttgcatcacccgaagtgaaagaaaattttcaacagaagta
gaagatacggccggtttgcgtgtctcagataattttagtgttaaagcaccaaagtcaaaa
tcaagttcgctcgaggctggaggctacaaggagatcagcttaaatcagctgcctcctcat
tctggaaatcagggtgaaacttcccgaataacacattccaaaagtcacaagtaccgacta
gcctctgtggtgcatcactttggaaaagttggtagtgggcattacaccgttttcagacga
gtgacaaccaaaattggtgaagacaatcatgctggactactgggatctgctgttgataat
tggttttgcatctcagacaccgacgtgtatagggtctccgagagagatgttcttgatgct
gaagcaaccttacttttctatgaaaaagtttctgattgctaa
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