Solanum stenotomum: 125856891
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Entry
125856891 CDS
T08385
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
125856891
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sstn01001
]
125856891
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125856891
Enzymes [BR:
sstn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125856891
Protein kinases [BR:
sstn01001
]
Serine/threonine kinases: Other
VPS15 family
125856891
Membrane trafficking [BR:
sstn04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125856891
Autophagy
Autophagosome formation proteins
PI3K complex
125856891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
WD40
VPS15-like_hel
WD40_WDHD1_1st
WD40_CDC20-Fz
HEAT
WD40_Prp19
WDR55
Beta-prop_TEP1_C
EIF3I
PK_Tyr_Ser-Thr
NBCH_WD40
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
PEP5_VPS11_N
Cohesin_HEAT
TCAD9
Lipoprotein_15
APH
Beta-prop_Vps41
HEAT_EZ
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
125856891
NCBI-ProteinID:
XP_049392502
LinkDB
All DBs
Position
2:60038259..60047643
Genome browser
AA seq
1552 aa
AA seq
DB search
MGNKIAKTTQASAMEYYLHDLPSSYNLVLKEVVGRGRFLKSILCKHDEGLVLVKVYFKRG
DFIDLREYEHRLSKIRDIFTSLDHPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LCLVEKKWLAFQLLYAVKQSHEHGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEIHVSQDAPLKPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQHDPSQLLEKIPDSGIRKMILHMIQLDPDSRYSAESYLQNYAGVVFP
SYFSPFLHNFYSLLNPLNSDARVLICQTSFNEILKQMMSDKPGDRNPPAVSPHSVPVSQT
RQVSEMNENLNLVKDSLSNREEIEKGSVHDRFDLLGNVNTLLRDVKQNNQCPVVKPLLED
IANTAYSQKQRQCHIQSPVEQIPVSSISFKRIHHPFLKKITMEDLTVLMSDYDNQSDTFG
MPFLPLPEEVMSCEGMVLIASLLCSCIRNIKLPFMRRGAVLLLNSCSLYIDDEDRLQRVL
PHVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVR
ICYASNISKLALTAYGFLIHSISLSEAGVLNETNSSQNSSISTSGEPVRPQSLNSDTQLG
QLRKSVAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQRQSNDFLLPILPAFLNDRDE
QLRAVFYGQIIYVCFFVGQRSVEEYLFPYIEQALTDTTEAVIVNALDCLAILCKSGFLRK
RFLLEMIDRSFHLLCYPSQWVRRSSVTFIAASSENLGAVDSYVFLVPVIRPFLRRQPASL
ASEKALLSCLKPSVSKEMYYQLVENAKSSDMLERQRKIWYNSTPQSKQWETVDLLDRSSS
ELDRMKYWPGRKHDFPGYKSASDLTKPIDFTDCDDNPTKVKSVGSLIQDPSSIIDSGDRL
PSEKLQLSGFVSPQVSGMSSFIDKSADGIPLYYFKEDNKRPAGTGVAASDSSFPYTSFGF
GSSSLPWMDPVNKSFNLANSVPAPKLVSGSISIGNSSTLLRRVVHEVEDREADQTAYVNN
KFQDIGSGTSRTGSLTMEDNTAATDRTDLSSFARTSMITDSGWRPRGVLVAHLQEHRSAV
NDISISADHSFFVSASDDSTVKVWDSKKLEKDISFRSRLTYSLEGSRALCVTVLQGSAQV
VVGACDGTIHMFSVDYISRGLGNVVEKYSGIADVKKNEVGEGAVASLLNYCSDVGASKMI
LYSTQNCGLHMLDTRTSSHAWNTKVYPKEGYISSLVAGPCGNWFVSGSSRGVLTLWDLRF
CIPVNTWQYSLACPIERMSLFLPPPSTSLSVAARPLVYVAAGCNEVSLWNAENGSCHQVL
RVANNENEAENSDLPWALVKPSNKANPKQDLRRNNGSKYRVDELSDPPPRLSGIRALLPL
PGGDLLTGGTDLKIRRWDHCSPERSYCVCGPSIKGVVNDDFYETKSSFGVQIVQEAKRRP
LATRQTAKAILGAAAVDAAGCHRDCILSLASVKLNQRLVISGSRDGAVKVWK
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcaaaaacgacacaagcgtcggcaatggagtattacctccacgac
ttgccgtcgtcgtataatctggtgctgaaagaagttgtaggtagaggtcgctttttgaaa
tcaattctctgcaaacacgatgaaggacttgtgcttgtaaaagtctatttcaaaagaggg
gatttcattgatttacgcgaatatgagcatcgtctctccaaaattcgtgacatattcacc
tcccttgatcatccacatgtttggcctttccagttctggcttgaaacagataaagctgct
tatctgttgagacaatacttctttaacaatcttcatgatcgtcttagtacccgacctttc
ctctgtcttgttgagaagaaatggcttgctttccagttgctttatgcagtgaagcagagt
catgagcatggagtgtgtcatggtgatatcaagtgtgagaatgtgctagtcacatcttgg
aactggctttatcttgcagactttgcatcgttcaaacccacttatattccacatgatgat
ccttctgatttctccttcttctttgataccggtggacgaagacgatgctatcttgcaccc
gagagattttatgagcatggaggtgagatacacgtttcacaagatgctcctttgaagcca
tctatggacatctttgctgttgggtgtgttattgctgagcttttccttgagggccagccg
ttattcgaattgtctcaactgcttgcttatcgcagaggacaacacgatcccagtcaactt
ctggaaaagattccagattcaggaatccggaagatgattcttcatatgattcaattggac
ccagactcacgatattctgctgaaagctatctgcagaactatgcaggagttgtgttccca
agctacttctcaccattccttcataatttctattccttgttgaatccccttaattccgat
gcaagggttctgatatgccagacctcttttaatgagatccttaaacaaatgatgagtgat
aagcctggtgacaggaacccccctgctgtgagtccacattcagttcctgtcagtcaaaca
cggcaagtgagtgaaatgaacgaaaatctgaatttagtgaaggactcattgagcaacaga
gaagagattgagaagggctcagttcatgatcgctttgatctgcttggcaacgtgaacact
ttgctcagggatgtgaaacaaaataatcaatgtcctgttgtgaagcctttgctggaggat
atagccaatacagcatattctcagaagcaaagacaatgtcacatccaatctccagttgaa
caaatcccagtgagctccatttctttcaagagaattcaccatccttttttaaaaaagatc
accatggaagatttgactgtgttgatgtctgactatgataatcaatcggacacttttgga
atgcctttcttaccacttcctgaagaagtaatgagctgtgaaggaatggtgctgatagcc
tcattgttgtgttcctgcatacgtaatatcaaattgccttttatgaggagaggtgctgta
ttgctgttgaactcttgttccttgtacattgatgacgaagatcggttgcagcgagtactt
ccgcatgtgatagcaatgctgtcggatccagctgcaattgttcgttgtgctgccttagag
actttatgtgatattcttcctttggttagagattttcctccaagtgatgccaaaattttt
cctgagtatattctccctatgctttccatgcttcctgatgacccagaggagagtgttagg
atttgttatgcaagcaatatatcgaagcttgcgctaacagcttatggttttctgattcac
tcaataagcttgagcgaggcaggtgttctgaatgaaacaaattcatcccagaattcatca
atatcgacctcaggcgagccagtacggccacagagtctaaacagtgatacacaacttggt
caattaaggaagtcagttgctgaggttattcaagaactcgtgatgggcccaaagcaaact
ccaaacatcaggagagcgctattgcaagatattggtaacctttgttggttttttgggcag
aggcaaagtaatgatttcctgttgcccattctccctgcttttctaaatgatagagatgag
cagctcagggcagtattttatgggcaaatcatatatgtctgtttttttgttggacaaaga
agtgttgaagaatatcttttcccatacattgagcaggcattgactgatacaactgaggct
gtaatcgtcaatgcactagattgcttggccattctctgcaaaagtggctttctgcgcaag
cggttcctacttgaaatgatagaccgttctttccatttgttgtgctaccctagccaatgg
gtaaggagatcatctgtcacctttattgctgccagcagtgagaacttaggagcagttgat
tcttatgtttttcttgtccccgtaataaggcccttccttcgcaggcagccagcatctcta
gcttcagagaaagctcttctctcatgtctgaagccatcagtttcaaaagaaatgtactat
cagcttgtggagaatgcaaagagttcagatatgctggagagacaaagaaagatatggtac
aattcaacacctcagtcaaaacaatgggaaactgtagatttacttgacagaagcagcagt
gagttggatcgaatgaaatactggcctgggagaaaacatgattttccgggttataaatct
gctagtgatttaactaaaccaattgattttactgattgtgatgataatccgaccaaggtg
aaatcagtgggaagcttaatacaagatccttcgagcataatagatagcggtgatcgcctc
ccctcagaaaaattacagctatctggctttgtgtctcctcaagtcagtggtatgagcagc
tttattgataaatcagctgatggcattcctttgtactattttaaggaggataacaagaga
ccagcaggcactggtgtagcagcctctgattcctcatttccatatacttcatttggattt
ggttcttcatccttgccttggatggatcctgtgaacaaatcatttaacttggctaattca
gttccagcacctaagcttgtgtcaggttcaataagcattggcaatagctccacactgttg
cggagagttgtacatgaagtggaagacagggaagctgatcaaacagcatatgtgaataac
aagtttcaggacattgggtctggtacatctagaacgggttccctaacaatggaagacaac
acagccgcaacagatagaactgatttgtcatcttttgccagaacatccatgattaccgat
tcaggatggaggcctcgtggggttttggttgctcacctccaagagcaccgttctgctgtt
aatgatatatccatttcagcagaccacagcttttttgttagtgcatctgacgattctact
gttaaggtttgggattcgaaaaagctagagaaggatatctcattcaggtcaaggttaact
tattctttagaaggaagccgagctttatgtgttacagtgctccaaggttctgctcaagtt
gttgttggagcatgtgatggaacaatacatatgttctctgttgattatatctcccgagga
ctcggtaatgttgtcgagaagtactctggtattgctgatgtgaagaagaatgaagtggga
gagggtgctgttgcaagccttttgaactactgttcagatgttggtgcctcaaaaatgatt
ttgtacagcactcagaattgtgggctccatatgttggacacaagaacaagttcacatgcc
tggaacaccaaagtttatcccaaagagggctatatatcatctctagttgcaggaccctgt
ggaaattggtttgtatcaggttcctcaagaggtgtacttacactttgggatttgaggttt
tgcataccggttaacacatggcaatattctcttgcctgcccaattgagagaatgtctctt
tttcttcctcctcctagtacctcattgtctgtagcagcaaggccccttgtttatgttgca
gcaggttgtaatgaagtctctctatggaatgcagagaacgggagctgccaccaggttttg
agggtagcaaacaatgagaatgaggctgagaactccgacttaccttgggctttagtgaag
ccatcaaataaggctaatcctaaacaagatctaagaagaaataatggttcaaagtaccga
gttgatgaattgagtgatccgcctcctcgcctttctggcattcgtgcattgcttccatta
cctggtggtgatttgttaacagggggaactgacttaaaaatacgtcgctgggatcattgc
agcccggaacgaagttattgtgtttgcggaccatctataaagggggttgttaatgatgac
ttttatgagacaaaatccagctttggcgtacaaatagtgcaggaggcgaagaggcgacct
ttggccaccagacaaacagcaaaggcaatccttggagctgctgccgttgatgcggctggg
tgtcaccgtgattgtattctctctttggcttctgtcaaattaaatcagagacttgtgata
tcaggtagcagagatggagctgttaaggtttggaagtaa
DBGET
integrated database retrieval system
