KEGG   Solanum stenotomum: 125856904
Entry
125856904         CDS       T08385                                 
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like
  KO
K14791  periodic tryptophan protein 1
Organism
sstn  Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sstn03009]
    125856904
Ribosome biogenesis [BR:sstn03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    125856904
  Pre-60S particles
   Other pre-60S particles
    125856904
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 DSE1_N WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C PAC11 WD_LRWD1 Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_IFT140_2nd Beta-prop_WDR35_TULP_N ASA1 Beta-prop_WDR75_2nd Beta-prop_WDR41 TRM82_WD Beta-prop_Nup120_160 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 125856904
NCBI-ProteinID: XP_049392517
LinkDB
Position
2:59675604..59683912
AA seq 493 aa
MIAAISWVPKGVAKSIPAEADPPSKEEIEQILKSGLLDKREDSDDEEAEEDMNVDESKEN
EDDEVAIALAAADALGKATQVSSAGTDDIIDGLKELDMDNYDEEEEGIELFGSGLKDLYY
ASNDMDPYLKDKDNDSEEDDDMIIRPDDSVIVCASNEDDVSHLEIMILEDLSDGETNMYV
HHALIIPAFPLCTAWLDCPIKGGERGNFIAVGSMEPAIEIWDIDIIDEVQPSVILGGIAD
IKRKGKKKSIKYKKDSHKDAVLGLSWNKEYRNILASASADHSVKVWDVTTEACNLTMNDH
TDKVQAVAWNPFAPQILLSGSFDHTVCLKDGRKPSHSGFKFSVGADVESLAWDPHSEHSF
VVSLENGTVTSFDIRAASSASTSETKPNFTIHAHDKAVSSLCFNPLVPNLLATGSTDKMV
KLWDLTNNQPSCIASRNPKAGAVFTVSFSDDCPFFLAIGGSKGKLQLWDISSEDAVLKKY
GKYVAQKKPSPKS
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgatagcagctatttcatgggttcccaaaggggttgcaaagtctataccagctgaggct
gacccaccttcaaaggaggaaattgaacagattttgaagagtggtcttcttgataaacgt
gaagatagtgatgatgaggaagctgaagaagatatgaatgttgatgaatccaaggaaaat
gaggatgatgaagttgctattgcattagctgctgctgatgcacttggaaaggctacgcaa
gtttcttctgcaggaaccgatgacataatagatggtttgaaggaattggacatggacaac
tatgatgaagaggaggagggaattgagctttttggttcaggactcaaagacttgtactac
gcaagtaatgacatggacccatatctcaaggataaggacaatgactctgaagaagatgat
gacatgataataagacctgatgattctgttatagtttgtgcaagcaatgaggatgatgtc
agtcatctcgagataatgattttggaagatctatcagatggtgaaacaaacatgtatgtt
caccatgctcttattatacctgcatttcctctctgcacagcatggcttgattgccctatt
aaaggcggggagagaggtaacttcatagctgtgggttcaatggaaccagcaattgaaatt
tgggacattgacataatagatgaggtgcaaccatctgttattttaggtggcattgctgat
ataaaaagaaaggggaaaaagaaatctatcaaatacaaaaaggatagccacaaggatgca
gtacttggcctttcttggaacaaggaatataggaatatacttgctagtgctagtgctgat
cattctgtcaaggtttgggatgtgactactgaagcctgtaatctcactatgaatgaccat
actgacaaggttcaagcagttgcatggaatccatttgctccacagattcttctgagcggg
tcattcgatcatacagtttgcttgaaggatgggaggaaaccctctcacagtggatttaag
ttttcagttggtgctgatgttgaaagcttggcttgggatccacattcggagcattcattt
gtggtcagcttggagaacggtaccgttactagttttgatatccgtgctgctagttctgct
tcgacttcggagacaaagccaaattttaccatccatgctcatgataaagcagtgtcctcg
ttgtgcttcaatcctctagtcccaaatcttcttgcaactggctccacggacaagatggtt
aaattatgggatttgaccaacaatcaaccttcttgtatcgcatctaggaatccgaaagct
ggagccgtcttcactgtatccttctcagatgattgccccttttttcttgctattggtggc
tctaaaggaaagttgcagctatgggatatttcgtctgaagatgccgtgttgaagaaatat
gggaaatacgttgcacaaaaaaagccatcgcccaaatcataa

DBGET integrated database retrieval system