Solanum stenotomum: 125856912
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Entry
125856912 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125856912
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125856912
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125856912
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
125856912
NCBI-ProteinID:
XP_049392531
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Position
2:59765249..59771608
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AA seq
686 aa
AA seq
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MGKMMKGFLFWFTIIVQLFSIVTSRRTMHHARHTRVNHRHDEMMHPPPVTHRHVDMMHPP
PVTLHISNQYVVIDNGIVQLTLTNPTGHISGISYNGIDNLLEKSDLEVRRGYWDVMWKLP
KDQGGTFDTFFMKKFKVISQDDNKVEVSFTKTWSSSADHDLPLNIDKRFVMLRGNSGFYS
YGKFEHSEGMPALRVDEARIAIKLSQNLFHYMAVSDDRQRVMPTNQDISHGKVLGYKEAT
QITHPSNTPFNYEVDDKYQFSSDNKDIKVHGWICNNPHVGFWVITPTNEYTCGGPMKQDL
TSHSGPTSLATFFSGHYIGPQLGVDLQDGESWKKVFGPVFFYLNSDSGNNHQTLWEDAKR
QMFEETKKWPYDFPQSKEYLKANERATVSGRLLVNDRYISEDPFYAKSAYVGLALPGDVG
SWQTETKGYQFWTQTDESGYFKINGVIPGTYNLYSWVPGVIGDYKYNLNFTITQGSEYNL
GDLVYNPPRNGPTLWEIGIPDRTAAEFFVPDPLPSLTNHVFINTTHRFRQYGLWDRYTDL
YPNEDLVYRVGVSDYTKDWFYAHVTRRTVHKQYIPTTWQILFDLSTVDPSGTYTLHIAFA
SATSSHLLGRINNPIRPRPTFQTPGIGQSNAIARHGIHGLYSLFTFEIPGYNLQIGENII
YLTQARGGSPFNGVMYDYIRLEGPPQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagatgatgaaaggatttttattttggtttacaattatagtacaacttttctcg
attgttacttcgaggaggacgatgcatcatgcaaggcatacccgagtaaatcatagacat
gatgagatgatgcatccccctccagtcacacatagacatgttgatatgatgcatcctcct
ccagtcacactgcacatctcaaatcaatacgtggtgatagataatggcattgttcaactt
actctaacaaatccaactggacatatttctgggataagttacaatggaattgataatcta
ctggaaaaaagcgatctagaagtaaggagaggatattgggatgtcatgtggaaacttcca
aaagaccagggtggcacttttgatacgtttttcatgaaaaaattcaaagttatatcacaa
gatgataataaagttgaagtttcttttacaaaaacgtggagttccagtgcagaccatgat
cttcctctaaacatcgacaaaaggtttgtgatgctaagaggaaattcaggattttattca
tatggaaaatttgaacattcagagggaatgcctgcacttagagtagatgaagcaagaatt
gcaatcaagctcagtcaaaacttgttccactatatggctgtatcagatgataggcaaagg
gtaatgcctacaaatcaagatatatcccatggaaaagtccttggctataaagaagctact
caaataacacatccatccaacactccattcaactatgaggttgatgacaagtaccaattt
tcttctgataacaaagatatcaaagtacatggatggatttgtaataatccacatgtaggt
ttttgggtgattacacccactaatgaatatacatgtggtggaccaatgaaacaagatctt
acttctcattctggtcccacctctctagctacattttttagtggccattatataggtcca
caattaggagtggatctacaagatggagaatcatggaaaaaagtatttggtcctgttttc
ttttatctcaactcagattctggtaataaccatcaaacactttgggaggatgctaaaaga
cagatgtttgaagaaactaaaaaatggccatatgatttcccacaatcaaaagaatatctc
aaagccaatgaacgggcaacagttagcggtcgattattggtcaacgacaggtacataagt
gaagatcctttttatgcaaaatctgcatatgttggattggccctgcctggagatgttgga
tcatggcaaactgagaccaagggttatcaattttggactcaaacagatgagtctggatat
ttcaagattaatggagttatacccggaacttataacttgtactcatgggtccctggagtt
attggagattacaaatacaaccttaactttaccatcactcaaggaagtgaatataatcta
ggtgacttagtttataatcctccaagaaatggtccaactctatgggaaattggaattcct
gatagaactgctgctgaattttttgtgcctgatccattgcctagcctcaccaaccatgta
ttcatcaacactacacataggtttagacaatatggtttatgggatcgttatacagattta
tatcctaatgaagatttagtatacagagttggtgttagtgattacacaaaagattggttc
tatgcccatgtaaccaggaggactgtacataaacaatatataccaacaacatggcaaatt
ttatttgatctttcaactgtggatccaagtggaacttatacactacatatagcatttgct
tctgccacttcttctcatttgctaggaagaataaacaacccaatcagaccaaggccaact
tttcagaccccaggaattggacaaagtaatgcaatagcaagacatggaattcatggacta
tactcacttttcacttttgaaattccgggctataatttacaaatcggagaaaatataata
tatttaacgcaagctagaggtggtagcccttttaacggagtaatgtatgattatattaga
cttgaaggacctccacagtaa
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