Solanum stenotomum: 125857032
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Entry
125857032 CDS
T08385
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
sstn
Solanum stenotomum
Pathway
sstn04145
Phagosome
sstn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125857032
09142 Cell motility
04814 Motor proteins
125857032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125857032
03036 Chromosome and associated proteins [BR:
sstn03036
]
125857032
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sstn04812
]
125857032
04147 Exosome [BR:
sstn04147
]
125857032
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125857032
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
125857032
Cytoskeleton proteins [BR:
sstn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
125857032
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125857032
Exosomal proteins of other body fluids (saliva and urine)
125857032
Exosomal proteins of colorectal cancer cells
125857032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
125857032
NCBI-ProteinID:
XP_049392658
LinkDB
All DBs
Position
2:complement(5808891..5811745)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMVKCDPRHGKYMACCLMFRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGADLEEGEDDDHEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagaatgcatatcgatccacattggtcaggccggtattcaggtcggaaatgcatgc
tgggaactttactgccttgagcatggcattcagcctgatggccagatgccaggcgacaag
acagttggaggaggtgatgatgcattcaacaccttcttcagtgaaactggagctggaaag
catgttccccgtgctgtctttgtggatcttgagcctactgtcattgacgaagtcaggaca
ggaacatacaggcagctctttcaccctgagcagctcatcagtggcaaagaagatgcagcc
aacaactttgcccgtggacattatacaattgggaaggagatagttgatctctgcttggat
cgtatcaggaagcttgccgataactgtactggtcttcaaggtttcctggttttcaatgct
gttggtggtggaactggttcaggtcttgggtcacttctgctggagcgtctctctgtggac
tatggaaagaaatcaaaacttggtttcaccatttatccatcaccacaggtctcaacatct
gtggtggaaccttacaacagtgtcctgtcaacccactcccttcttgagcacactgatgtc
gcaattcttcttgacaatgaggctatctatgacatttgcaggcgctcattggacattgag
cgtcccacatacaccaatcttaaccgtcttatttcacaggttatctcttcacttactgct
tctttgaggtttgatggagccctgaatgttgatgtcaatgaattccagaccaaccttgtt
ccctaccccaggattcattttatgctttcatcctatgctcctgtcatttcagccgagaaa
gcctaccatgagcagctgtcagttgcagagattaccaacagtgcttttgagccatcttcc
atgatggtcaagtgtgatcctcgccacggcaagtacatggcttgctgccttatgttccgt
ggtgatgttgtgccaaaggatgtgaatgctgctgtggctaccatcaagactaagcgcacc
atccaatttgttgactggtgccctactggattcaagtgtggtatcaactatcagccacca
actgttgttcctggaggtgatcttgccaaggtgcaaagggctgtatgtatgatttccaac
tcaaccagtgttgctgaggtcttctcacgcattgaccacaagtttgatctgatgtatgcc
aagcgtgcttttgtgcactggtatgttggtgagggtatggaggaaggtgagttcagtgaa
gcacgtgaagatctagctgctttggaaaaggattacgaggaggttggtgctgatttggaa
gaaggagaggatgatgatcacgaggaatactaa
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