Solanum stenotomum: 125857175
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Entry
125857175 CDS
T08385
Name
(RefSeq) vacuolar-sorting protein BRO1-like
KO
K12200
programmed cell death 6-interacting protein
Organism
sstn
Solanum stenotomum
Pathway
sstn03250
Viral life cycle - HIV-1
sstn03272
Virion - Hepatitis viruses
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125857175
03272 Virion - Hepatitis viruses
125857175
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125857175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125857175
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125857175
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
125857175
Exosome [BR:
sstn04147
]
Exosomal proteins
Proteins found in most exosomes
125857175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Dsl1_C
RIBIOP_C
Motif
Other DBs
NCBI-GeneID:
125857175
NCBI-ProteinID:
XP_049392811
LinkDB
All DBs
Position
2:complement(71506085..71516237)
Genome browser
AA seq
910 aa
AA seq
DB search
MAAPSSMTAKTANVMLTIPEKKTVSLDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQFRS
DIERGPNESSLPARRDLLQNYYKALCAVESRFPISPDQDHINSVTFTWYDAFKNKLKAAQ
QNIYLEKAAVLFNLGAVHSQMGLGFDRSSVEGRRQGSHSFIAAAGVFAFLRDNVAMKASM
GSSNTVDVSVECAGMLERLMLAQAQECVFENSIAKGNTPGVCAKISRQVGLFYEEALAAL
NVAPLNQHFDKAWLAHVQLKASLFYAEACYRYSLELHDKEEIAEEIARLKSGVNALSEAR
KTSPRGAPQQLLDAITKLEASSNLNLEKAIKENDRVYLMRVPPASSLPPLAAFSLVKPMQ
MNDILDASKEKMFSSLVPDNSAKALSRYTEMVDDVIRTQAEKLQQGSELARVRLREMDLP
DSILALEGNLSLPVALKEDVEAVQICGGPAGLDAEMQQLRDLKRVNQELLVQTEELLQKE
ATEDTQFRTQFGTRWARPQSTTLTKNLQDRLNRFAANLKQAAESDVRIERSVRDHAALMS
ILDCRPIESALPTLARPILSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKDMKRKD
DILPKLMAFTGSQEDLFRKEIAKYDHLCEEISQNLDAQEQLLLQIQAQNDEFASIFNLED
YKASRERIYKQIEVAIMKYQEIKENINEGLKFYVTLQEAITNVKQQCSDFVMTRNMQCRE
MMEEVQRQISGLSFQDNKSSSGYTYPSVGHAHQPPRSNPQTPTETGHIPNSSRPHQAPTY
QPPPQQPTMSGYSQTSPPYSSPQPPAPPPQQPTMSGYSQTSPPYSSPQPPYHFPGQGQVQ
GQPYSHPQPYPQHQQQPPPSHEYGQPAYPGWRGPYYNAPPQQPGAMPQPPYTAPSPYPHP
PPHQSGYYRQ
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaccgtcgtcaatgacggcgaaaacagccaacgtcatgcttacaatccctgag
aagaaaactgtctctctagatctctaccgtccactccgaaactacatagtctacaattac
tctgaacgcgaagctcaaaatctcgaagatgatcttcaaacgcttaagcaattccgttcc
gatatcgaacgtggccctaatgagtcgtctcttcctgctcgccgtgatcttttgcagaat
tactataaagccctttgtgctgttgagtctcgtttccctatttcacctgatcaagaccat
attaattctgttacatttacttggtatgatgctttcaagaacaagctcaaagctgctcag
cagaacatctatttagaaaaagctgcagttttgttcaatctgggggcagtgcacagtcag
atgggattgggttttgatcgttcatcagttgaggggagaagacagggatcacattccttt
attgctgctgctggggtatttgccttcttgagagacaatgtggcaatgaaggcatcaatg
ggtagctccaacactgttgatgtctctgtcgaatgtgctgggatgctggaaagactcatg
ttggctcaggctcaggagtgtgtttttgagaatagcattgccaagggaaatactcctggt
gtctgtgcaaagatttcaagacaggttggattgttttatgaggaagctttggcagcatta
aatgttgcacctctgaaccagcactttgacaaggcttggctagctcatgttcagcttaag
gcatcactgttttatgctgaggcctgctacaggtacagtctagagctgcatgacaaagaa
gaaattgcagaggaaattgcaaggttgaagagtggtgttaatgccttgtctgaggcaaga
aaaacatctccaaggggagcaccacagcagctcttggatgcaattactaagctagaagct
agttcaaatctaaacttggagaaggctattaaggaaaatgatcgagtctacctcatgagg
gttccaccagccagttctctgccaccacttgcagcattttccttggtcaagcctatgcag
atgaatgatattctggatgcaagcaaagagaagatgttttccagtcttgtcccagacaac
agtgcaaaagctctttctaggtacactgagatggttgatgatgtcatcagaactcaagcc
gagaagttacaacaggggagtgagctagctcgagtgaggctcagagaaatggacttgcct
gattctattctggccttggagggaaacttatcactacctgtggctttaaaagaagatgta
gaggcagtgcaaatttgtggtggtccagctggtttggatgctgagatgcagcaactcaga
gatctgaagagggtgaaccaggagttgttggtccaaacggaggagctcttgcaaaaagaa
gcaacggaagatacacagtttagaactcaatttggaacccgatgggcaaggcctcaatct
actaccttaacaaaaaacctgcaggacaggttaaataggtttgcagcaaacctgaaacaa
gctgcagaaagtgatgtcaggattgagcgttcagtaagggatcatgcagcactcatgtca
atccttgactgccgtccaatcgaatctgctcttccaaccttggcaagaccaatcttgtct
ttggacgccactgaagatgccattgtgggagccctgaagcagagcctgaggcaactagaa
actcttggtgctcagcgtgctggtctggaagatatgctgaaagatatgaagaggaaggat
gatatacttccaaaattgatggcattcacgggctcccaggaggatcttttcaggaaggag
atagcaaaatatgatcatctttgtgaagaaatttctcaaaatctcgatgcacaagaacag
ttgcttctgcaaattcaggctcaaaatgatgagtttgcatctattttcaatcttgaagac
tataaagcttcccgcgagagaatctataagcagattgaagttgccattatgaaatatcaa
gaaatcaaggaaaatatcaatgagggattgaagttctatgtaacccttcaggaggcgatc
actaatgtgaaacagcaatgtagtgattttgtgatgacaagaaacatgcagtgccgagaa
atgatggaagaggtacagaggcagatctcaggtctcagtttccaggataataaaagttca
agtgggtatacttatccttcagttgggcatgctcatcagccaccaagatccaatccccag
acgccgaccgagactggacatatacctaattcttctcgaccacaccaggctcctacatac
cagcctcctcctcagcaacctacaatgtcgggatatagtcaaacttctcctccttatagt
tctccacaaccgcctgcacctcctcctcagcaaccaacaatgtctggatatagtcaaacc
tctcctccttatagttctccacaaccgccataccattttccaggtcaaggacaagttcaa
ggtcaaccatattcgcatccacagccctatcctcaacatcagcaacaacctccacctagc
cacgagtacggccaacctgcatatcctggttggaggggtccatactataatgcacctcct
cagcaacccggagctatgcctcagcctccttacacagccccttctccatatcctcatcct
cctccccatcagagtggctattacaggcaatga
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