KEGG   Solanum stenotomum: 125857569
Entry
125857569         CDS       T08385                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
sstn  Solanum stenotomum
Pathway
sstn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125857569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sstn03021]
    125857569
Enzymes [BR:sstn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     125857569
Transcription machinery [BR:sstn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     125857569
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 125857569
NCBI-ProteinID: XP_049393136
LinkDB
Position
3:complement(12016048..12026757)
AA seq 1216 aa
MTISDIMEEVGCSSGKEKISNGSARMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKE
LGETYLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR
GDGDWKHASVKFGKVTLERPKFWAGEKFSADGGKEYLDLLPRHARLQNMTYSARIMVETH
VQVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEF
DHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHI
KGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNC
EDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHS
FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHY
LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGK
VGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKLVD
DCATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFS
DPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYILKA
DKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNR
VDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQ
EDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMSKKLKIEDSVNFGKTQSKIGRVDSLD
DDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR
QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEA
ALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGP
TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHE
RLFTLSDSSQMHICGKCKNMANVIQRTVQGGKVRGPFCRFCESVEDIVKVNVPYGAKLCQ
ELFSMGISLKFDTEIC
NT seq 3651 nt   +upstreamnt  +downstreamnt
atgacaatctctgatatcatggaggaagtgggatgtagtagtggtaaagagaagatatct
aatggatcagcaaggatggattttgatattgatgatctttttgaagtagatgatgatgat
tgggacgaggacgaggatgaagatgaggatgatagccatgatatggttttaattaaagag
ttgggtgaaacttacttgaagaacttctgtaaaaaggcatcaactggtttttttgagaag
tatggtttaatcagtcaccagataaattcatataatgacttcatcaactatggaatccaa
agggtgtttgactcggttggggagatccatgttgagccaggttatgatccatcaaagaga
ggtgatggtgattggaagcatgcttctgtgaagtttgggaaagtaacccttgagcgaccg
aagttttgggctggggagaagttttctgcagacggtgggaaagagtacctggacttgttg
ccacggcatgctcgcctccagaacatgacatattctgccaggattatggttgagactcat
gttcaggtgtatacaaaaaagctagttagaagtgacaagttcaaaactggcgtagaccag
tttgttgacaaggagtgtgaagtggaagacaaaagggatgtcttgattgggagaatccct
gtgatggttaactcagaattgtgctggatgaatggtgttgacaagcttgactgtgaattt
gatcatgggggatacttcattgtcaaaggggctgaaaagaccttcattgcacaagagcag
ctttgtttaaaaagactctgggtgtcaaacaatcccacttggatggttggatatcgccca
ggtgaaaaaaggaagagagtctacattaaattgactgagaccttgaagcttgagcacatt
aagggaggagaaaaagccctcagtgtttacatccttgcagaaatgccaatttgggtcttg
ttttttgctctaggtgtttcctctgacagggaggtagtaaatttaattgatgtggatatt
gaagatactactatcgtcaatatactagtagcttccatccatgaggctgataagaattgt
gaggatttcaggaaggggaaaaaggctcttgcttatgttgatagacttataaagaattgt
aaatttccacctcaagaatctgttgaggagtgcataaatgcatacctgttccctaatctt
agtggtttcaagcagaaggctcgcttccttggctatatggtaaaatgcctcttgcactct
ttcattggtcgcagaaaggttgacaacagagatgattttcgaaacaagagattggagctg
gctggtgagctcctagaacgagagctcagggcacacattaaacatgccgagaggcgtatg
gtgaaggcaatgcaaagagatctttatggagatcgacaagtgcagccaattgagcattac
ttggatgcatcaataattaccaatggtctctccagggctttttccactgggcattggtgt
cacccttacaagagaatggagagggtttccggtgtagttgcaactcttagacgaacaaat
ccattgcaaatgactgctgatatgaggaaatcgcgtcagcaggttacatacaccgggaag
gttggcgatgctagatacccacatccttcacactggggaaaactatgttttctatctacc
ccagatggagaaaattgtggcctggtgaaaaatttggctagtatgggtcttgtcagcaca
attattttgaaaccatttcttgagacattgttccggtgtgggatgcaaaagttagtagac
gattgtgccacctcactccatggaaagcaaaaggtcctacttgatggggagtgggttgga
gtatgtgaagattctgcactcttcgtttcaaagctaagacgtaagcgccgcaggaatgaa
gtgccacaccaggttgaagttaagagagatgagctgcagggtgaagttcgcatattttct
gatcctggaaggattctgcgtcctcttcttgttgtttcaaatctaaagaaaatcaaagct
ttgaaagggggagactatggctttcaatctcttctggacaatgggattattgagtttata
ggacctgaagaagaagaagactgtcgaactgcatggggagttgagtacatcttaaaagca
gataaagagaacccacctgctaagtatactcattgtgagttggacatgtcattcctacta
ggcttgagctgtggtattatcccatttgcaaaccatgatcatgctaggagggtcctctat
caatctgagaagcactctcagcaggcaattgggttttcaacagtgaatccaaacaataga
gttgatacaaatacccatcaattgtattatcctcagaggccacttttccggacaatgttg
gcagattcccttgggaaaccaaaatgtactcagtaccagaaaggaatgcttccacggcct
gaatacttcaatgggcaatgtgcaattgtcgcagtaaatgttcaccttggctataaccaa
gaagattcattggtcatgaatcgtgcttcactggagcgcggaatgtttcgatctgagcat
gttaggagctataaggctgaggtcgacaataaggaagcaatgtctaagaagctaaagatt
gaggactctgtcaactttgggaaaacccagagtaaaattggacgagtggacagcctagat
gatgatggttttccattcattggggcaaatctccagagtggagatatcataattgggaaa
tttgctgaatcaggggctgatcacagtgtcaaactgaagcatacggaaaggggcatggtt
cagaaggttttgctctctgctaatgatgaagggaagaattttgctgttgtatctctcaga
caagttcgttctccatgtcttggagacaagttctccagcatgcatggacaaaagggtgtc
cttggatttctggaatctcaggaaaacttcccttttaccgttcaggggattgttccagat
attgtaatcaatccccatgcatttccttcaaggcaaacccctggtcagctgctagaagcc
gctctggggaagggcattgccctaggtggtggtcaaaaatatgccactcccttctccact
ttatcagttgatgccataatggagcagcttcaggggcgaggattcacgagatggggaaat
gagagagtttacaacggtcggacgggtgaaatggttcattccctgattttcatgggccca
acattctaccaacgcctcatccatatggctgaagacaaggtgaaattccgtaacactgga
cctgtccatccccttactcgccaacctgtggcagacagaaaacgctttggtggaattaag
tttggtgaaatggagcgcgactgtcttatagctcatggtgctgcagcaaatctgcatgaa
cgccttttcacactcagtgactcttcccagatgcacatatgtggtaagtgcaagaacatg
gcaaatgtaatccagagaactgtgcaaggtggtaaggttaggggtccgttttgccggttc
tgtgaatcagtcgaagatatagtgaaagttaatgtgccatatggtgcaaagttgtgccag
gagctcttcagcatgggcatatctctcaagtttgacactgagatttgctaa

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