Solanum stenotomum: 125857680
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Entry
125857680 CDS
T08385
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125857680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125857680
Spliceosome [BR:
sstn03041
]
Complex B
Other components
Prp19-related factors
125857680
Complex C
125857680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
125857680
NCBI-ProteinID:
XP_049393247
LinkDB
All DBs
Position
3:1781717..1782841
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AA seq
374 aa
AA seq
DB search
MDTTTTTQETKEALEKIIHVERRNHVPTHSQKCIKYKSNNSQERIIKMLGMPVDPIDPPK
FKHKKIPRASGSPPVPLMHSPPRSISVKDQLDWNIPPCISDWKNPKGYTIPLDRHIASNG
RGLQEVHVNDNLAKFTEALNVAEEQARKAVAMRFKVQEEIMLKHKENKEMELRELASKAR
SDQKNAACLMNDMNYERAREDRLQRKKIFEERCSERRLEATMGGEKKRKITRDRDRDISE
KLALGMASTSRGGEVMIYDQRLFNQEKGVASGFAPTDDAYNIYDRGLFTAPHQPALSILY
RPNKDVDSDMYGGGADEKTDRSFKPDTAFVGTSERRGPRDTPVKFEADPFGLNQNVRKLV
GISMMVQHTANKNT
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggatacaacaacaacaacccaagagactaaggaagcccttgagaagattatacatgtg
gaaagaagaaatcatgttcccacacattctcaaaagtgtattaagtacaagtctaataat
tcccaagagaggattattaagatgttgggcatgccggtggatcctattgatccacccaag
ttcaagcacaagaagatccctagggcttctggttccccacctgtgccccttatgcattct
cctcctcgttccatctcggtgaaggaccaactggactggaatattcccccttgtatatca
gattggaagaaccccaaaggttacacaatcccacttgataggcatattgcttctaatggc
agaggacttcaggaggtccacgtcaatgataatttggcaaaatttacggaggctctaaat
gttgcagaagagcaagccagaaaagcagttgcaatgcggttcaaagttcaggaagagatt
atgttgaaacacaaggaaaataaagaaatggaactacgagagttggcctccaaggcaaga
tctgatcagaaaaatgctgcatgtctcatgaatgatatgaattatgaacgtgcaagagaa
gaccgattacagagaaagaaaatatttgaggaacgatgcagtgagaggagattagaggca
acaatgggtggtgagaagaagagaaagatcaccagagatagagaccgtgatatcagtgaa
aagttggctcttgggatggcttctacatcaagaggaggagaggtcatgatatatgaccag
agattgttcaaccaggagaaaggggtggcttctggatttgcccctactgatgatgcctac
aacatctatgatagaggcctatttactgctcctcatcagcctgcactttctattttatac
agaccgaacaaagatgtggattctgatatgtatggaggaggtgctgatgagaagacagat
cgtagctttaagcctgacacagcatttgttggaacatctgagagacgaggtccaagagat
acaccggtgaaatttgaagctgatccatttggtttgaaccagaatgtgaggaagctggtt
gggatcagcatgatggttcaacatacagcaaataaaaacacttaa
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