Solanum stenotomum: 125857744
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Entry
125857744 CDS
T08385
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125857744
04121 Ubiquitin system [BR:
sstn04121
]
125857744
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
125857744
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
125857744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
DUF5681
NCBP3
Motif
Other DBs
NCBI-GeneID:
125857744
NCBI-ProteinID:
XP_049393328
LinkDB
All DBs
Position
3:complement(4483901..4487725)
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AA seq
1125 aa
AA seq
DB search
MSFPAQNNRRNNNSNRPRSINNNPVVQSGGARREWVARGSTPTNTVPFSAAPVTPVSTTT
VVTPGFGGNGRDNDNVPVVPVNQFQNQNQTYVEPKFNRGTYGNQRGRGRGSYNHQENRME
RPVREVSGRINQERVKDPNLPQLVQEIEEKLLKGNIECMICYDMVRRSAPMWSCSSCYSI
FHLHCTKKWARAPTSVDTSADKNQGFNWRCPGCQSVQLTSSRDIRYLCFCGKRQDPPSDL
YLTPHSCGEPCGKKLEKELPGNGLSEEDLCPHVCVLQCHPGPCPPCKAFAPARSCPCGKE
VITTRCSDRKSVLTCGQQCGKLLDCGRHRCEQTCHVGPCGHCQIVVDAYCFCKKKTESVL
CGDMGVKGDIKMEDGVFSCNSVCGRKLSCGNHICRELCHPGPCGDCALLPSKVKACCCGK
TSLEEERHSCLDPIPTCSKVCGKRLRCGVHRCEAVCHSGDCAPCLVPVNQRCRCGSTSRT
VECYRTQAEDEQFTCDRPCGQKKNCGRHRCSERCCPLSNPKNSITGGWNPHFCSMPCEKK
LRCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPLPSCQLPCSVSQPC
GHPPTHSCHFGDCLPCAVPVAKECVGGHVILRNIPCGSKDIRCNKLCGKTRQCGLHACAR
TCHPSPCDVSAGPSNGSRDSCGQTCGAPRRDCRHSCTALCHPSSSCPDVRCEFPVTITCS
CGRITANVPCDAGGQIVDSVFEASIIHKLPSSLQPIELNGKKVPLGQRKLICDDECAKME
KKKVLSDAFGITPPNLEALHFGENAAVSEVLGELLRRDAKWVLSIEERCKFLVLGRSRGG
VNALKVHVFCPMSKEKRDAIRLIAARWKLSVNAAGWEPKRFIAVHVTPKSKAPTRILGPK
GCTVNNIAQPAVFDSLVDMDPRLVVALFDLPRDADISALVLRFGGECELVWLNDKNALAV
FNDPARAATAMRRLDQGSAYCGAAVVHQSGVASAVASATNVWGVSGGAKDGGGVAALKGN
PWKKAVVQEPHLRESLWDADEWSKNPTDLAAPSAWRANEAPPTASSNRWSVLEPEITSSL
PRVSITIQKPVTETEVGGSVLPPKPQDVGIDDMADVVDDWDKAYD
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcctgcacaaaacaatagaaggaataacaacagtaatcgacctagaagcatt
aataataatcctgttgttcaaagtggtggtgctcgtcgtgagtgggtagctaggggatcc
actccaaccaacactgttccattttcagctgcccctgttaccccggtatcaacaaccact
gttgtgacccctgggtttggtgggaatggaagagacaatgataatgtgccagttgtgccg
gttaatcaatttcaaaatcaaaatcagacctatgtggaacccaaattcaatagggggaca
tatgggaatcagaggggaaggggcagggggagctataatcatcaggagaacaggatggag
aggccggtcagggaggtcagtgggaggattaatcaagagcgggtgaaggatcctaatttg
cctcaacttgtgcaagaaatagaggagaagctgttgaagggaaacattgagtgcatgata
tgctacgatatggtgaggaggtctgcgcccatgtggtcatgttcgagctgctactcgatt
ttccatcttcattgtaccaagaaatgggcaagagctcccacttctgttgacacatctgca
gataagaatcaagggtttaattggcgttgcccaggttgtcaatcagtccagctcacttca
tccagggacatacggtatctttgcttttgtgggaagaggcaagaccccccttcagattta
tacttgactccacattcatgtggagagccttgtggcaagaaacttgagaaggagcttcca
gggaatggtctgagtgaagaggatctttgccctcatgtttgtgtcctacaatgccatcct
ggtccttgtccaccttgtaaggcatttgctccagctagaagttgcccctgcgggaaggaa
gtaattaccactcgctgctctgatcggaagtccgttcttacatgtggacagcagtgtggt
aagcttcttgactgtgggcgtcatcggtgtgaacaaacttgccatgttggtccttgtggc
cattgtcaaattgttgtggatgcctattgcttttgtaagaagaaaacagagtctgttctt
tgtggagatatgggtgtgaaaggagatatcaagatggaggatggcgtcttttcatgcaat
tcagtttgtggaaggaagcttagttgtggaaaccacatctgccgtgagctctgccatcca
gggccatgtggggactgtgctttgttgcctagcaaggtcaaggcatgctgttgcggtaaa
accagcttggaagaagaaaggcacagttgtttggatccaattccaacctgttccaaggtc
tgcggaaagcgcctccgttgtggggtacatcgctgtgaagctgtgtgccattctggtgac
tgtgcaccatgtcttgttcctgtgaatcaacgctgccgctgtgggtcaacttctcgaaca
gtagagtgttacagaacgcaggcagaagatgagcagttcacttgtgatagaccttgtggg
caaaagaagaactgtggaaggcatcgatgtagtgagcgatgttgccctctttctaatcca
aaaaactccatcacgggtggttggaatcctcatttttgttcaatgccgtgtgagaagaag
cttagatgtgggcagcattcttgcgagtcactttgtcacagtggtcactgccctccctgc
cttgagacaattttcaccgatttgacttgtgcttgtgggagaacatcaatccctcctccg
ctgccttgtggcacacctcttccttcctgtcagttaccatgctcggtttctcagccttgt
ggccacccacctactcacagctgccattttggggactgcttgccatgtgctgttcctgta
gcaaaagagtgcgttggtggacatgtaattttgagaaatataccttgcggatcaaaggac
atcaggtgtaacaagctttgtgggaagaccaggcagtgtggcttgcacgcatgtgctaga
acttgtcatccttcaccatgtgatgtttctgccggacccagcaacggctccagagactct
tgtgggcagacgtgtggtgctcctagaagagattgcaggcactcatgtactgctctttgt
cacccctcttcttcatgtcctgatgttagatgtgagtttcctgttactattacttgttct
tgtggccggatcacagcaaatgttccttgtgatgctggaggtcagatcgttgactctgtt
ttcgaagcttctataatccacaagctgccttcatctcttcaacctattgaattaaatggg
aagaaggttcctcttggtcagaggaaacttatttgtgatgatgagtgtgcaaagatggag
aaaaaaaaggttctttctgatgcttttggtataactccccctaatttggaggccctccat
tttggtgagaatgcagctgtctccgaagtgctgggggagcttcttaggcgggatgctaag
tgggtgttgtctatagaggaaaggtgcaagtttttggttcttggcaggagcagagggggg
gtgaacgcgctcaaagttcatgtgttttgcccaatgtcgaaagaaaagcgggatgcaatt
agactgatagctgcaaggtggaagctttcagtaaatgcagctggttgggaacccaagaga
ttcatcgctgtacatgttacacccaaatccaaagctccaacgcgtatacttggtcccaaa
ggttgtactgtcaataacattgctcagcctgctgtttttgattctctggtggatatggat
ccaaggcttgttgtggctttgtttgacttgccaagagatgcagacattagtgcgttagtt
ctcaggtttggtggtgagtgtgagcttgtctggttgaatgacaagaatgccttggctgtg
ttcaatgatcctgcccgagcagcaacagctatgagaaggctagaccagggttcggcctat
tgtggtgctgctgtagttcatcagagtggtgttgcatcagcagtggcatccgctactaat
gtttggggagtctctggaggagcgaaggacgggggaggagttgcagctcttaagggtaat
ccatggaagaaggctgtagtccaggagcctcatttgagggagagtctatgggatgccgat
gaatggtccaagaatccgactgatttagcagccccttctgcctggagggcgaatgaagct
ccacctactgcctcgtctaataggtggagtgtcttagagcctgaaattacttccagcttg
cccagggtgtctattacgatccagaaacctgttactgagacagaagtggggggttcagtt
ttaccccccaaacctcaagatgtggggattgacgatatggcagatgtagtggacgattgg
gacaaggcttacgattga
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