KEGG   Solanum stenotomum: 125857863
Entry
125857863         CDS       T08385                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein RRC1-like
  KO
K12842  U2-associated protein SR140
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125857863
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sstn03041]
    125857863
Spliceosome [BR:sstn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125857863
 Complex B
    125857863
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 125857863
NCBI-ProteinID: XP_049393471
LinkDB
Position
3:19150699..19168110
AA seq 979 aa
MSARKKTPFQKHREEEEAKKKRAEDETARLYQEFVESFQADNTPGSKAFVRGGTINPNDK
LKMDSQGGNSKDEGSGLKKGSRYVPSFLPPPMATKGRDHEKKQKEDKPREKEKGKARNID
NFMEELKHEQEMRERRNQDREQWRDRHTENSAPSSRFDELPDDFDPSGRPGSFDDGDPQT
TNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADAQA
AKDEMEGVIVYEYELKIGWGKSVSLPSQALPAPPPGHMAIRSKEGATVILSGPSGPPVTT
VPGQNSELVLTPNVPDIMVIPPEDDHLRHVIDTMALCVLDGGCAFEQAIMERGRGNPLFS
FLFELGSKEHTYYVWRLYSFAQGDTLQRWRTVPFIMITGSGRWIPPSLPTPKGADHEKEA
GSTYAAGRSRRVEVERTLTDAQRDEFEDMLRSLTLERSQIKAAMGFSLDNADAAGEVVEV
LTESLTLKETPIPTKVSRLMLVSDILHNSSAPVKNASAYRTKFEASLPDIMESFNDLYRS
ITGRITAEALKVLCLSPTFDLHSLHLLYPFFNVWLIFPCMLQERVLKVLQVWADWFLFSD
AYVNGLRATFLRTGNSGVTPFHSLCGDAPDVEQRASSDDAGDGGKVNPDGALAIGKGAAM
KELLSLPLTELERRCRHNGLSIVGGREMMVARLLYLEEAEKQRGHELDEDLKFASHSSSA
RFPSTRKDSNLELDRMAPSERNSQVDYDVQLKQRESVSSHQTNSAPHYNSIDFSSEGKSE
TILPTSKWAREDDESDDEQKRSSRDLGLTYSSSGSENAGDGLSKIKDAELTTDTSNSAYP
ESGMNEELRQKLRRLEVALIEYRESLEEQGIKSPDEIERKVEIHRQCLQAEYGLLNFSED
ASKKGGRSSSERREKRDDAREASRKRQRSRSRSGSPQWKSSSRDRDSDREKRRDRERKSG
SRERDDHDRDKSRERRRAR
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgagtgctcggaagaagacccctttccagaagcatagagaagaggaagaggcaaagaaa
aagagggcagaagatgaaacagctcgtctgtatcaagagtttgtggaatcgttccaagcg
gacaatacaccaggttccaaggcatttgttagagggggaaccatcaatccaaatgataaa
ttgaagatggattctcaaggtggaaattctaaagatgaggggtcaggtttaaagaaggga
agtaggtatgtgccttctttcttaccacctcctatggcaactaagggaagagatcatgaa
aagaagcagaaggaggacaagccgagggaaaaagagaagggcaaggctaggaacattgat
aatttcatggaggaactgaaacatgagcaagaaatgagggaaaggcgtaaccaagaccgt
gaacagtggcgtgatcgtcatactgaaaattctgctccatctagtcggtttgatgaactg
cccgatgactttgatcctagtggaaggcctggatcatttgatgatggagacccacaaacg
acaaatctctacgtaggaaatctatcacctcaggttgatgagaattttcttttgcgcaca
tttgggagatttggccccattgctagtgtaaaaataatgtggccaaggactgaagaggaa
agaaggcgacagaggaattgtggttttgtagctttcatgaatagagctgatgctcaggct
gcaaaggatgagatggaaggagttattgtttatgaatatgagttgaagattgggtggggt
aaatctgtctctctgccttctcaagcactacctgctcctcctccaggacatatggctatc
aggagtaaggagggtgcaactgttatcttatcgggtccatcaggtcctccagttactact
gttccaggccagaattctgagttggttctcactccaaatgtacctgatattatggttatt
ccaccagaggatgatcatcttcgccatgttattgatacaatggctctgtgtgttctcgac
ggaggttgtgcttttgaacaagccataatggagcgaggtcgtggaaatcctctcttcagt
ttcttgtttgagcttggctcgaaggagcatacttactacgtttggaggctctattctttt
gctcagggagatactcttcaacgatggaggacagtccctttcatcatgataactggtagt
gggaggtggataccaccctctctaccaacaccgaaaggagctgatcatgaaaaagaagct
gggagcacatatgctgctggaagaagcaggcgagtggaggttgaacggacattgactgat
gctcagagggatgaatttgaggatatgctccgttcattgacactagaaagaagtcaaata
aaagcagcaatgggtttttctttggacaacgctgatgctgctggagaggttgttgaagtt
ttgacagagtcgttgacacttaaggaaactccaataccaacaaaagtttctaggctcatg
cttgtctctgatattcttcataatagtagtgctcctgtgaagaatgcatctgcttatcgc
accaaattcgaagcctctttaccagacataatggaaagcttcaatgatctatatcgaagt
ataacagggcgaattactgccgaggcacttaaagtactgtgcctgtcacctacatttgat
ctgcactcgctacatcttttgtatcctttttttaatgtgtggttaatttttccttgcatg
ttacaggagagagttctgaaagtgcttcaagtatgggctgattggtttttgttttcggat
gcctatgtcaatggtttacgagctacctttctccgaaccgggaactctggtgtgaccccc
ttccattctctgtgtggtgatgcacctgacgtggaacaaagggccagctctgatgatgca
ggtgatggcggcaaagttaacccagatggtgctttggcaattggcaaaggagctgcgatg
aaggaactgctgagccttccacttactgagctagaaagacgatgcaggcacaatggttta
tctatcgtaggtggtagggaaatgatggttgctcggttactttatctggaagaagctgaa
aagcagaggggtcatgaactagatgaagatttgaaatttgcaagccattcaagttctgct
aggttccccagtactcggaaagatagcaaccttgagttggacaggatggctccttccgaa
cggaacagtcaagtggattatgacgtacaactcaaacaaagagagtctgtatcttcacac
caaacaaattctgctccacactataattcaattgacttttccagtgagggcaaaagtgag
acaattttgcctacatctaaatgggccagggaggatgatgaaagtgatgatgaacaaaag
agaagttctagggacctggggttgacatattcatcttctggaagtgagaatgctggtgat
gggcttagcaagatcaaggatgcagagcttacaacagacacaagcaattcagcatacccg
gaaagtggaatgaacgaagagttgaggcaaaagcttaggcgtcttgaggttgcattgatt
gaatatcgtgaatctcttgaagaacaaggaataaaaagtccggatgaaattgagaggaaa
gttgaaatccatcggcaatgcctacaagctgaatatggtttattgaatttcagcgaagat
gcatcaaaaaaaggaggcaggtcatcttcggagaggagagagaaaagagacgatgctcgt
gaagcttctaggaagcggcagcgcagtcggagcagaagtggaagccctcagtggaaatct
tccagcagagaccgtgatagtgatagggaaaagcgtcgtgatagggaaaggaagagtgga
agcagggagagagatgatcatgatagagacaaatctagggagaggagacgggccagatga

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