Solanum stenotomum: 125857869
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Entry
125857869 CDS
T08385
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125857869
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
125857869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
125857869
NCBI-ProteinID:
XP_049393476
LinkDB
All DBs
Position
3:complement(2102286..2110226)
Genome browser
AA seq
698 aa
AA seq
DB search
MASYRPFPPPSQSSFVPPPPPPQNQNPPPPPSQSRGSQYSQNWGGYGVNDGSSYTQQNYS
QVHQSSNYQHPGYAPPPPATRNQYPPPPPPPADSSYPPPPPPSGQPPPPPAPMYYPSSQY
SQYSQNQPLEPPPPPPPPSSPPSSAIPPPPPPSQPPSPPPPPSSVPSQNQRNESRPSAEK
RRESGWRESGHGNHTTRSKQPGHSVPPLPVKKSNAPSGRVETEEERRLRKKREIEKQRHE
EKNRQYLKESQNKVLQKTQMLTSGTKGHGSISASHMADRRTAPLLSGERTENRLKKPTTF
LCKLKFRNELPDPTAQPKLLTLRRDPDRFTKYSITSLEKMHKPQLYVEPDLGIPLDLLDL
SVYNPPKGVKIPLAPEDEELLRDDNPITPIKKDGIKKKERPTDKGVSWLVKTQYISPLST
ESAKQSLTEKQAKELRETKGGRNILENLNKRDRQIQEIEASFEACKSRPIHATNRRLQPV
KVQPLYPDFDRYKDPFVLANYDSAPTADSETYNKLDKTVRDACESQAVMKSFVATSSDAD
KPDKFLAYMVPAPNELSKDMYDENEDISYSWVREYHWDVRGDDADDPNTYVVAFGETEAR
YMPLPTKLVLRKKRAREGKSNEEVEHFPVPSKVTVRKRPTAAAIELKEEGGYTTALKGNV
SSSKRTRISHEDDVGEQHNNMHDDDQDQSSGGEYYMSD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtataggccatttcctccaccgtcgcagtcgagttttgttcctccgccaccg
cctccgcagaatcagaaccctccgccaccaccgtctcaatccaggggaagtcagtactcg
cagaattgggggggttacggagtgaatgatggatcttcgtatacccagcagaattactct
caggtgcaccagagttcaaattatcagcatcctggttacgctcctccacctcctgcgacc
agaaatcagtatccacctccgcctcctcctcctgcggattcttcatatccacctccgcca
ccaccttctgggcagccacctcctcctcctgctccaatgtattatccatcttctcagtac
tcccagtatagccaaaaccagcccttggagcccccacctccaccccctccaccttcgtct
cctccaagttctgctattcctcctcctcccccaccttctcagccaccgtcccctccgcca
cctccttcatcagttccctctcagaaccaacgtaatgaaagcaggcctagtgcagagaaa
aggcgagaatctggctggcgtgaatcaggccatggtaaccacactactcgttctaaacag
ccaggccattctgttcctccattgccagtgaaaaaatccaatgctccttcaggaagggtt
gagactgaggaagagaggaggttaaggaagaagagagagatagaaaagcaaaggcatgaa
gagaagaatagacagtatttaaaggaatcacagaataaggttctgcagaaaacccaaatg
ttaacttctggtacgaagggtcatgggtcaattagcgcatcacatatggctgacagaaga
accgcccctttgctaagtggcgagaggacagaaaaccggttgaagaagccgacaacattt
ctttgcaagttaaaattcagaaatgaattaccagatccgacagcgcaaccaaagcttttg
actttaagaagagacccagatcgatttacaaaatactcaattacttcattggagaaaatg
cacaagcctcaactatatgtcgaaccagaccttggaattccacttgaccttcttgatctc
agcgtatacaatcctcccaagggcgtaaagataccacttgctccagaagatgaagagttg
ttgcgcgatgacaatcctataacccccatcaagaaagatggcataaaaaagaaggaaagg
ccaactgacaaaggtgtttcttggctggtcaaaacacaatacatctctcctcttagcacg
gagtcagcgaaacagtctcttactgaaaagcaagctaaagaattgcgagaaacaaaaggt
ggacgcaacatcttggagaatcttaacaagagagatagacaaatccaggagattgaggct
tcttttgaggcatgcaagtcacggcccattcatgcaaccaatcgcagattgcaacctgtc
aaagtccagccactttaccccgactttgatcggtacaaggacccgtttgtgcttgcgaat
tacgatagtgctccaactgctgattcagaaacctacaacaagttggataaaactgtccgt
gatgcatgtgaatcacaggccgttatgaaaagctttgtggctacaagctcagatgcagat
aaacctgacaaatttctggcatatatggtccctgcaccgaatgagctgtcgaaggatatg
tatgatgaaaatgaggatatctcatactcttgggttcgggagtatcactgggatgtacga
ggtgatgatgcagatgatcctaatacgtatgttgtggcgtttggggaaacagaggcccgt
tacatgcctcttccaacaaagcttgttctgagaaaaaagagagctagagagggaaaatca
aatgaagaagtcgagcatttcccagttccctcgaaagtcacagtaaggaagagaccaact
gcagctgccattgaactgaaagaagaagggggttatacaacagctttgaaggggaatgtt
tcaagttcaaagagaacaagaatcagtcatgaagatgatgttggtgaacaacataacaat
atgcatgatgatgatcaagatcaatctagtggtggcgagtactatatgtctgattga
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