Solanum stenotomum: 125857887
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Entry
125857887 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125857887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125857887
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125857887
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
125857887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
Motif
Other DBs
NCBI-GeneID:
125857887
NCBI-ProteinID:
XP_049393503
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All DBs
Position
3:17479050..17483532
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AA seq
316 aa
AA seq
DB search
MEMENIECVSSTDGIEDEEIQLSHNHNHQFSSAKPHNIILPGLAPTSVHELLECPVCTNS
MYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYFSLGCP
EIFPYYSKLKHEALCNFRPYNCPYAGSECSVTGDIPYLVSHLRDDHKVDMHTGCTFNHRY
VKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESEARNYSYSL
EVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWK
EQQNPEGGVCIPNLCS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagaacattgagtgtgtttcgtcaactgatggtattgaagatgaagagatc
cagttatctcataatcataatcatcaattttcttctgcaaaacctcataatattattctt
cccggacttgcccctactagtgtacatgaattgcttgaatgccccgtttgcaccaattct
atgtatccaccaattcatcagtgtcacaatgggcacacactttgttctacctgcaaaaca
agagtgcacaatcgatgtcctacatgtagacaagagcttggtgatataaggtgcttagca
ctggagaaggttgcagagtcacttgaactgccttgcaaatatttttctttgggatgccca
gaaatattcccatattacagtaagctcaagcatgaggcactgtgcaattttagaccatac
aattgcccatatgctggatcagaatgttcagtgactggtgacatcccttatttggtttca
catttaagagatgatcacaaagtggatatgcacacgggatgcacattcaaccatcgctac
gtgaaatcaaatcctcgagaagtagaaaatgccacatggatgctgacggtcttccattgt
tttggacagtatttctgtctccactttgaggcatttcagcttggtatggcccctgtttat
atggcatttctacgatttatgggtgatgagtctgaggcacgcaattacagctatagtctc
gaagtaggaggaaatggtagaaagctcatatgggagggaacaccaagaagtgttcgagat
agccaccgcaaggtcagggacagtcatgatggtctaataatccaacgtaacatggcactt
ttcttttctggaggggatcgaaaggagctaaaacttcgagttactggaaggatatggaaa
gaacagcaaaatccagaaggtggagtgtgcataccaaatctgtgtagctaa
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