Solanum stenotomum: 125858049
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Entry
125858049 CDS
T08385
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
sstn
Solanum stenotomum
Pathway
sstn04130
SNARE interactions in vesicular transport
sstn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125858049
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125858049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125858049
Membrane trafficking [BR:
sstn04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
125858049
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Gene cluster
GFIT
Motif
Pfam:
Longin
Motif
Other DBs
NCBI-GeneID:
125858049
NCBI-ProteinID:
XP_049393680
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Position
3:19849058..19851505
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AA seq
219 aa
AA seq
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MVKVTIIGRVSDGMPLAQGPRLHEENNDVLTTHKKQAEFILKEISLQALPSSKMTILVDH
HCFNYMVENGICYLTLCESSYPRKLAFHYLQDLQQEFERLDSSLVDRITKPYTFIKLDTI
IGNIRKQYVDTRTQANLSKLNAHRQKELDIATEELSLIKERRRRVEMMERMMEAHISTSP
VWESKRLEIIALKWTPITILLVVASVLLWTGLILQDDFR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggtgacaattatagggagggtaagtgatgggatgcccttagcacaaggtcca
agattacatgaagagaataatgatgttttaacaactcacaagaaacaagctgagttcatt
ctcaaggaaatttctttacaagccttgccatcttccaagatgaccattcttgtagatcac
cattgcttcaactacatggttgaaaatgggatttgctatctgacattgtgcgagtcgtcg
tacccaagaaagcttgcattccattatctacaagatttgcagcaggagtttgaaagatta
gatagcagtcttgttgacagaataacaaaaccatataccttcatcaaacttgatactatc
attggcaacattaggaagcaatatgtggatacaagaacacaagcaaatttatctaaacta
aatgctcatcgtcaaaaggaattagatatcgcaacagaggaattatcactaataaaagag
agaaggcgaagagtagaaatgatggaacgaatgatggaagctcacataagtacttctcca
gtctgggagtctaaaaggcttgagatcatcgctcttaaatggacaccgattacaatcctt
cttgttgttgcttctgttcttctatggaccggcttaatcctccaagatgattttagataa
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