KEGG   Solanum stenotomum: 125858107
Entry
125858107         CDS       T08385                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125858107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sstn03041]
    125858107
   03400 DNA repair and recombination proteins [BR:sstn03400]
    125858107
Spliceosome [BR:sstn03041]
 Complex B
  Other components
   Prp19 complex
    125858107
 Complex C
   Prp19-CDC5 complex
    125858107
DNA repair and recombination proteins [BR:sstn03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    125858107
SSDB
Motif
Pfam: BCAS2 AKNA THOC7
Other DBs
NCBI-GeneID: 125858107
NCBI-ProteinID: XP_049393747
LinkDB
Position
3:3936993..3940816
AA seq 251 aa
MATKDGDILMLEAPPEYRPAVSSSAEVIDALPYIDDDYGDPNVKEEVDRLVEEEMRRSSK
KPSDFLKNLPPLRKFNFENHPMLAREYERVRAGKPPVQIDTSRYGLEVPPVNKRNDETAW
KQSLQKAQRLLQHQVIRLENLDLMSKHGPDVWKLYNQRLEAFLARMQSQAAELNEMIETA
NRERKYHQQTTAYELNALSMQWRELCLKNIEIQSACGELQDHREQLKKEAQERGWNLEAS
VENGKVLYAEL
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcgacaaaagacggtgacattttgatgctagaggccccgccggagtatcgtccggca
gtgtctagtagtgcggaagtgatagatgctttgccgtacattgatgacgactacggtgat
cccaacgtgaaagaagaggtggaccgtttggtcgaagaggagatgcgccgcagctccaaa
aaaccttccgatttcctcaaaaatctccctcctcttcgtaaattcaacttcgagaatcat
cctatgcttgcgagggaatatgagcgggtgagagctggaaaacctccagtacaaatagat
acttcacgatatggacttgaggtgccgcctgtgaacaaacgcaatgatgaaactgcatgg
aagcaatcccttcaaaaagctcagcgtttactgcagcatcaagtaatcaggctagaaaat
ctggatctaatgtcaaagcatggtcctgatgtgtggaagctgtacaatcaacgattggag
gcatttcttgccagaatgcaatcacaagctgctgaactgaatgaaatgatagaaacagca
aacagggagaggaagtatcatcagcaaactactgcatatgagctcaatgcgttgtccatg
caatggagagagctctgtctgaaaaatatagaaattcaatctgcatgtggggaactacaa
gaccacagagaacaactgaagaaggaggctcaagagaggggctggaatttggaggctagt
gttgagaatggcaaagtgctgtatgcagaattatga

DBGET integrated database retrieval system