Solanum stenotomum: 125858148
Help
Entry
125858148 CDS
T08385
Name
(RefSeq) alanine--tRNA ligase-like
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125858148
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sstn01007
]
125858148
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125858148
Enzymes [BR:
sstn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
125858148
Amino acid related enzymes [BR:
sstn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125858148
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125858148
Prokaryotic type
125858148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
125858148
NCBI-ProteinID:
XP_049393794
LinkDB
All DBs
Position
3:complement(15254074..15266527)
Genome browser
AA seq
773 aa
AA seq
DB search
MGDTGPCGPCTEIHFDRIGNRDAASFVNNDDPTVIEIWNLVFIQFNREADGSLKPLPAKH
VDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQKATGARPYSGKVGADDVDNIDMAYRV
VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGTEVLKAQQGFFSSLVKVVVEVM
GDVFPELKQREAHIRDIIADEETSFGRTLLHGIEKFKKAAQEVQGKQFSGQEAFVLWDTY
GFPLDLTQLMAEERGLVVDVDGFNVAMDAARERSRNAQSKNAGGAIAMDADATAALHKKG
VAATNDIFKFTWSQDHESEIKAIYTGSEFLESAAAGDEVGIILESTSFYAEQGGQIYYTG
SLESPSGAFQVCNVQIYGGFILHIGSFSGQAHKFSVGDKVICKVDYNRRTLIAPNHTCTH
MLNFALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVKPEELRKIESIVNEQIKSELDVYS
KEAKLSDAKSIKGLRAVFGEVYPDPVRIVSIGQKVEDLLANPENEEWSSYSAELCGGTHI
SNTREAKAFALMSEEGIAKGIRRVTAVTTYRAFEATDLASSLEQKVNEAFQTDESLLEEK
VTSLNATAERAQIPTVMKTDLKAKLSVLQNQVIKAKKKIAAENIQKAVRAASEMAEAAAS
GGKAYCILQIGVGLDTAAVREAVVKVMEQKGMAVLVFSKDEAANKVLVCAGVPEKGDKCQ
QLNVKDWLNAALKPLGGKGGGGKGGLAQGQATDISKVDEAMDVAASFAAMKLN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatactggaccttgcggaccctgcaccgaaatacactttgatagaatcgggaat
cgtgatgctgcatcatttgttaataatgatgatcccactgtgattgagatatggaacctt
gtctttattcagtttaacagggaagctgatggttctttgaaaccccttccagctaagcat
gttgatactggaatgggttttgaaagactaacctctatcctccagaacaagatgagcaat
tatgatactgacgtgttcttacccatatttgatgctatacaaaaggcaactggagctcgt
ccgtactctggcaaagttggagctgatgacgtggacaatattgatatggcctatagagtt
gttgctgaccacattcgaactctgtcttttgccattgctgatggttcttgcccagggaat
gaaggccgtgaatatgtcctcagacgcattctacgtcgagcagtgcgctatggtacagag
gttctgaaagcgcaacaaggatttttcagtagccttgtgaaggtggtggtagaagttatg
ggtgatgtcttcccagagctgaagcaacgtgaggcacatattagagatatcattgctgat
gaagaaactagctttggaaggacattgcttcatggaatcgagaaatttaagaaggcagct
caagaagttcaagggaagcaatttagtggtcaggaggcatttgtcttgtgggacacttat
ggatttccattagatttgacccagttaatggcagaggaacgaggcttggtggttgatgtt
gatggttttaatgttgctatggatgctgccagggaaagatcaagaaatgctcagagcaag
aatgctggtggtgcaattgccatggatgctgacgctactgctgcattgcacaagaaaggg
gtcgctgcaacaaatgatattttcaagttcacttggtctcaggatcacgagagtgagata
aaagctatctacactggaagtgagttcttggaaagtgcagcagctggggatgaagttggt
attattcttgagagcaccagtttctatgctgaacaaggtggtcagatatactacactggt
tcactggaaagccccagtggcgcttttcaagtttgtaatgttcaaatttatggaggattc
attcttcatattggatctttcagtggacaggcacacaagttctctgttggtgataaagta
atttgtaaggttgactataacaggcgtacattgattgctcccaatcatacatgcactcac
atgttaaatttcgccttaaaggaagtactaggtgaccatattgaccagaaaggttccatt
gttcttcctgaaaaattgagatttgacttctctcacgggaagccggtaaagccagaggag
ctaagaaaaattgaatccattgtcaatgagcaaattaagtctgaattggatgtatactca
aaggaggcaaagctgtctgatgctaagagtataaaaggtcttcgagctgtctttggtgaa
gtgtatccagatcctgtgcggattgtgtcaattggtcagaaagtggaggaccttcttgct
aatccagaaaatgaagaatggtcatcctattctgctgagctgtgtggtggaacacacatt
tctaatacaagagaagctaaggcatttgctctgatgtctgaggagggaattgccaaggga
atccgaagggttactgctgtcacaacttatcgtgcttttgaggccactgatttggcatcc
tcacttgaacagaaagtaaatgaagcattccagactgatgaaagcttgctggaagagaaa
gtaacttctttgaatgctaccgcggagagggcacaaattcccactgttatgaaaactgat
ctcaaggccaagctctcagtcctccagaatcaagttataaaggccaaaaagaagatagct
gcagagaatatacaaaaagccgttagagctgcctcagaaatggctgaagctgcagcttct
ggtggaaaagcatactgcatcttgcagattggcgtgggtttggacactgctgcagtccgt
gaagcagttgtcaaagtcatggagcagaagggtatggcagttctggtattcagcaaagat
gaagctgcaaacaaagttttagtctgtgctggtgtacctgagaaaggtgacaagtgccag
cagttgaatgttaaagattggttgaatgcagctttgaagcccttgggaggtaagggtgga
ggaggaaaaggtggtctcgcccaaggccaggcaactgatatatcaaaagttgacgaggca
atggatgttgcagcatcatttgcagctatgaaattaaattga
DBGET
integrated database retrieval system
