Solanum stenotomum: 125858192
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Entry
125858192 CDS
T08385
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125858192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sstn04040
]
125858192
Ion channels [BR:
sstn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125858192
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125858192
NCBI-ProteinID:
XP_049393857
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Position
3:complement(17860085..17866224)
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AA seq
708 aa
AA seq
DB search
MNHRQEKFVRFQDWNSEKSSEGNFTYKDGVRGGKFGVFSNELRKALESGSGRIKSIIHAL
SSCLNCLLAKSLGSENKMLDPQGPFLQKWNKIFVLSCVIAISLDPLFFYIPVIDNNNKCL
HLDRKMEVTASVLRSITDIFYLFHIVLQFRTGFIAPSSRVFGRGVLVEDAWEIAKRYLSS
YFLIDILAVLPLPQVAILVVIPKLQGAKSLNTKTLLKFVVFFQYIPRLLRVYPLYKEVTR
TSGILTETAWAGAAFNLLLYMLASHVLGAFWYLFSIERESTCWQRACGNTSACHHSSLYC
DDDHTNFIKLLNDSCPIETPNTTLFDFGIFHEALKSGVVESMDFPQKFFYCFWWGLQNLS
SLGQNLETSTYVWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTLRLEEMRVKRRDAEQW
MSHRLLPEHLRERIRRYEQYKWQETRGVDEENLILNLPKDLRRDIKRHLCLALLMRVPMF
EKMDEQLLDALCDRLRPVLYTENSFIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSD
YLKAGDFCGEELLTWALDPHPSNNLPISTRTVQALSEVEAFALVADDLKFVASQFRRLHS
KQLRHTFRFYSQQWRTWAACFIQAAWRRHCRKKLEESLCEEENRLQDALAKGGGSSPSLG
ATIYASRFAANALRALRRNTAKKARMADRISPILLQKPAEPDFTAEDK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccggcaagagaaatttgtgaggtttcaggattggaactcagagaaaagctca
gaggggaattttacatataaagatggagtacgcgggggcaaatttggagtgttctccaat
gaattacgcaaagccctggaaagtggttctggaaggattaaaagcataatacatgcctta
agttcttgtttaaattgccttctggccaaaagtttgggatcagaaaacaagatgcttgat
cctcaaggaccttttcttcagaagtggaacaaaatatttgtattatcctgtgtaattgcc
atctccttggatcctttgttcttttacattccagtgattgataataacaacaaatgcctg
catttggatagaaaaatggaggttacagctagtgttttgcgttccatcactgatatcttt
taccttttccatattgtgcttcaatttcgtactggtttcatcgccccttcatcacgtgta
tttggaagaggcgttttggttgaagatgcgtgggaaatagcaaagagatacttgtcctct
tacttcttaatagatattcttgcagttcttcctctaccacaggtcgcaattttagttgtc
attccgaaattgcagggtgctaagtctttgaatacaaagactttgctgaaatttgtcgtc
ttcttccaatatattccgaggctccttcgagtataccctttatataaggaagtcactaga
acttctggcatactcactgaaacagcatgggctggagctgcgtttaatctccttctttat
atgcttgccagtcatgtacttggagccttttggtacctgttttctattgaacgtgaatct
acttgttggcaacgagcatgtggaaatacatctgcttgtcatcattcttcattgtactgt
gatgatgatcatacaaatttcataaaattgctgaatgattcatgtcctatagagacacca
aatacaacgctttttgattttggaatattccatgaagcactaaagtctggtgttgtggaa
tcaatggattttccacagaagttcttttattgtttctggtggggtttgcagaacttgagt
tccctcggtcaaaacctcgaaacaagtacctatgtctgggaaatttgctttgcagttttc
atttccatcgctggcttggtgctattttcatttctcattggaaacatgcagacgtatctg
cagtccacaacactcaggctagaagagatgagggtgaaaagacgagatgcagagcagtgg
atgtctcaccgcttactccctgagcacctccgggagaggatcaggcgctatgagcaatac
aagtggcaggaaactaggggtgttgatgaagagaatctgatcctcaacctgcctaaagat
ctcagaagagatataaagcgccatctttgtttggctttgctcatgagggttccaatgttt
gaaaaaatggatgagcaactcctggatgcactatgtgaccgtctcaggcccgtcctttac
acagagaacagcttcattgtgcgtgaaggtgatccggttgatgagatgctttttataatg
cggggcaaactattgactgtaaccactaatggagggaggacggggttctttaactctgat
tatctaaaagctggtgatttttgtggagaagagcttcttacttgggctctggatcctcat
ccatcaaataacctcccaatctcaacccgaactgtccaagcgctctcagaagtcgaagca
tttgctcttgtggccgatgatttgaaatttgtagcctctcagttccggagacttcatagc
aagcaactccgccatacttttaggttttactcgcagcaatggagaacctgggcggcttgc
ttcatacaagcagcatggcgccgtcattgtaggaagaagctagaagaatctctttgcgaa
gaagaaaacagattacaagatgcattagcaaagggaggtggtagctcgccaagtttgggt
gctactatctatgcatcacgatttgctgctaatgcacttcgtgctttgcggcgcaatact
gcaaagaaagcaaggatggcagataggatatcacccattttgcttcagaaaccagctgaa
ccagattttactgctgaagataagtaa
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