Solanum stenotomum: 125858366
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Entry
125858366 CDS
T08385
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sstn04990
]
125858366
Domain-containing proteins not elsewhere classified [BR:
sstn04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
125858366
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GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_NWD2_C
KNTC1_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
125858366
NCBI-ProteinID:
XP_049394082
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All DBs
Position
3:3884814..3891041
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AA seq
609 aa
AA seq
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MAELKETYACIPSTERGRGILISGDPKSNSILYCNGRSVIIRYLDRPLQVAVYGEHAYQA
TVARYSPNGEWIASADVSGTVRIWGTHNDFVLKKEFRVLSGRIDDLQWSPDGMRIVACGD
GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIATCGEDFLMNFYEGPPFKF
KLSHREHSNFVNCLRFSPDGSKLISVSSDKKGIIYDAKTGDIIGELSSEDGHQGSIYAVS
WSPNSKQVLTVSADKSAKIWDISDDGKGKVKKTLASPGSGGVEDMLVGCLWQNDHLVTVS
LGGTISIFSASDLEKSPVSFSGHMKNVNSLAVLRSDPKIILSTSYDGLIVKWIQGIGYSG
KLDRKVTSQIKCFAIVEGEIVSCAFDNKIWRVSLLGDQCGDANSVDVGTQPKDLSLALNS
PEVTLVSFETGVILLRGTEVLSTINLGFTVTASVISPDGTEAIVGGQDGKLHLYSITGDT
LNEEVVLEKHRGAITVIRYSPDVSMFASADVNREAVVWDRASREVKLKNMLYHTARINCL
DWSPDNTMVATGSLDTCVIIYDVSKPASHRITIKGAHLGGVYGLAFTDERSIVSSGEDAC
VRVWGITPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctcaaagaaacttacgcttgtataccttccactgaacggggtcgcggtatt
ctcatttcgggtgacccgaaatccaactctatcctttattgtaacggccgatccgttatt
attcggtacctcgatcgccccctccaagttgcagtttacggggagcatgcttatcaggct
acagtcgctcgttattctcctaatggtgagtggatcgcttctgctgacgtttcaggtact
gttcggatctgggggacccataatgacttcgttcttaagaaagagtttcgggtcctatcg
ggtcggatcgatgaccttcaatggtctcctgatggaatgcgcattgttgcttgtggtgat
ggcaagggcaaatcacttgttcgtgccttcatgtgggactcgggaacaaatgtgggtgaa
tttgatggccattcaaggagagttttgagttgcgcttttaaacccacaagaccatttcgc
atagcaacgtgcggtgaagacttcttgatgaacttttatgaaggaccaccatttaaattc
aagctgtctcacagggagcattcaaattttgtcaattgtttgaggttctctccagacgga
agcaaacttatcagtgtaagctctgacaagaagggcattatttatgatgccaaaacagga
gatataattggagagctgtcatctgaggatggtcatcaaggaagtatatatgctgttagt
tggagtcctaatagtaaacaggtgctcacagtctctgctgataagtcagcaaaaatatgg
gatatatctgatgatggaaaagggaaagtgaagaaaacactggcttctccaggttctggt
ggagttgaggacatgctagttggctgtctctggcaaaatgaccatcttgttactgtttct
cttggtggaactatttccatattctcagcaagtgatctggaaaaatctcccgtgtcattt
tctggacacatgaaaaatgttaattccttagctgtcctcagaagcgacccaaaaatcata
ttgtccaccagttatgatggtttgattgttaaatggattcaaggcattggatatagcggg
aaattagacagaaaggtgacttctcaaatcaaatgctttgcaattgtggaaggagaaatt
gtgtcatgtgcgtttgacaacaagatctggagagtatctctgcttggagatcaatgcgga
gatgcaaattctgtagatgttggcacccaacctaaggacttaagccttgcccttaattct
cctgaagtaactttagtttcgtttgaaactggagtcattcttctccgtggtacagaagtg
ctgtcaaccataaacctcggatttacggtgacggcatctgttatttcacctgatggaact
gaagcaatagtgggtggtcaggatggtaaacttcatttgtattccatcacgggtgatact
ctcaatgaagaggttgtccttgaaaaacacaggggagctattactgttattcggtactct
ccagatgtttccatgtttgcatcagcagatgtgaaccgagaagctgtcgtctgggatcgt
gcatctcgcgaggttaaacttaagaatatgttataccatactgcccgaataaattgcctg
gattggtcacctgataacaccatggtagctactggatctctagacacatgtgttataata
tatgacgtcagcaagccagcatcgcatcgaatcactattaaaggagctcatttgggtgga
gtatatggactagcttttactgatgaacgcagtatagtgagttctggcgaggatgcttgt
gttcgtgtatggggaatcactccacagtaa
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