KEGG   Solanum stenotomum: 125858389
Entry
125858389         CDS       T08385                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
sstn  Solanum stenotomum
Pathway
sstn04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    125858389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sstn04131]
    125858389
Membrane trafficking [BR:sstn04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    125858389
   mTORC2 complex
    125858389
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_IFT140_1st WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_Aladin Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_IFT140_2nd Beta-prop_VPS8 Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N DmsR_N
Other DBs
NCBI-GeneID: 125858389
NCBI-ProteinID: XP_049394107
LinkDB
Position
3:complement(37197237..37211026)
AA seq 315 aa
MSQPSVVLATASYDHTIKFWEAKSARCYRTIQYPESQVNRLEITPDKRFLAAAGNPHIRL
FDINSNSPQPLRSFDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGSLIVAA
NNRGTCYVWRLLRGTETMTNFEPLHKLQAHDGYILKCLLSPELCEPNRYLATASSDHTVK
IWNVDGFTLEKTLIGHERWVWDCVFSVDGAFLITASSDTTARLWSTSTGKDIKVYQGHHK
ATVCCALHDGPEPSS
NT seq 948 nt   +upstreamnt  +downstreamnt
atgagtcaaccatcagtggtgctagcaacggctagctatgatcacactataaaattttgg
gaggccaagagtgcccgctgctatcgaactattcaatacccagaatcacaagttaatcgt
cttgaaattactccggataaacgcttcttggctgctgctggaaatcctcacattcgatta
ttcgacatcaactcgaacagtcctcagccgctgaggagctttgattcacacactaataat
gtgatggcagtaggatttcagtgtgatggaaactggatgtattctggatctgaagatggc
actgtaaagatttgggatttgagggccccaggttgtcagagggaatatgaaagtcgggca
gctgtgaacactgtagttttgcaccctaatcagactgagttgatatctggagaccaaaat
ggcaatatccgtgtatgggatttgagagcaaattcatgtagctgtgagttggtaccggag
gtggatacagctgttcgttctttgactgtaatgtgggatggaagcttaattgttgctgca
aacaatcgtggaacatgttatgtttggcgtttactacgtggcaccgagacaatgaccaac
tttgagcctctgcataagttacaggctcatgatggttatatcctcaaatgtcttctttcc
cctgaattatgcgaacctaacaggtatctggcgactgcatcttctgatcatactgtcaag
atttggaatgtggatggctttaccttggagaaaactctgataggacacgaacgctgggtt
tgggactgtgtattctctgtagatggtgcttttctcatcacagcatcttctgatacaaca
gcaagattatggtccacatctacaggcaaagatatcaaagtataccaagggcatcataaa
gcaacagtatgttgtgctctacatgacgggcctgaaccttctagctga

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