KEGG   Solanum stenotomum: 125858391
Entry
125858391         CDS       T08385                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
sstn  Solanum stenotomum
Pathway
sstn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125858391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sstn04121]
    125858391
Enzymes [BR:sstn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125858391
Ubiquitin system [BR:sstn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125858391
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_2 zf-RING_5 zf-C3HC4_3 U-box
Other DBs
NCBI-GeneID: 125858391
NCBI-ProteinID: XP_049394108
LinkDB
Position
3:38087376..38088413
AA seq 235 aa
MALQQIFQHQIPETTFDQRDISFEKWNTINLDKLEENSPEGFECNICLDVVHDPVVTLCG
HLYCWPCIYKWIHFKTISSENIDNQQPNCPVYKAEVSQKTLIPLYARGQASKTSGKSLNL
GIVIPQRPPTPRCRSHGLIPNNNMPPLSQQSHDHHRNYTSTEHMLSLGGTTTGEIFYARM
FGNSLNTNLYTYSSSYNLAGSNSPRLRRQLSHADQSLSRICFFLCCCLVTCLLLF
NT seq 708 nt   +upstreamnt  +downstreamnt
atggccttacaacaaatttttcaacaccaaataccagaaactacctttgatcaacgcgat
atttcctttgaaaaatggaacacaattaatcttgataaacttgaagaaaactcacctgaa
ggtttcgagtgcaacatttgcctggatgttgtacatgatcctgttgttacattatgtggt
cacctctattgttggccttgcatctacaaatggatacattttaagaccatttcatcagag
aacatcgataatcaacaaccaaattgccctgtttacaaagctgaagtctcacaaaaaaca
ttgattccactctatgctcgcggtcaagcttcaaaaacatcaggcaagtccctgaatctt
ggtatagtcataccacaaagacctcctactccgagatgtaggagtcacggactaataccc
aataataatatgcctccattatcccagcaatctcatgatcatcatcgaaattatacgagt
acagaacatatgttaagtcttggtggaacgacaacaggggaaattttttatgcgcgaatg
tttgggaactcattgaatactaatttgtatacatattcaagttcatataatctagcagga
agcaatagtccaaggttaagaagacaactatcacacgcggatcaatcacttagcagaatc
tgttttttcctatgttgttgtttagtaacatgtcttctcttgttttaa

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