Solanum stenotomum: 125858552
Help
Entry
125858552 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125858552
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125858552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125858552
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sstn03037
]
125858552
Enzymes [BR:
sstn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125858552
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125858552
Chromatin remodeling factors
SRCAP complex
125858552
INO80 complex
125858552
INO80 complex (yeast)
125858552
SWR1 complex
125858552
ASTRA complex
125858552
Cilium and associated proteins [BR:
sstn03037
]
Motile cilia and associated proteins
Dynein assembly factors
125858552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
AAA_22
RuvB_N
DnaB_C
AAA_19
AAA_5
AAA_16
Mg_chelatase
AAA_25
Zeta_toxin
CBFD_NFYB_HMF
ATPase
bpMoxR
AAA_7
SLFN-g3_helicase
nSTAND3
TsaE
GvpD_P-loop
Motif
Other DBs
NCBI-GeneID:
125858552
NCBI-ProteinID:
XP_049394315
LinkDB
All DBs
Position
3:62854868..62859943
Genome browser
AA seq
469 aa
AA seq
DB search
MAMGELKISEMRDLTRIERIGAHSHIRGLGLDSSLEPRLSSEGMVGQIPARKAAGIMVKM
VQQGKIAGRALLLAGQPGTGKTAIAMGMAKSLGQETPFAMLAGSELYSLDMSKTEALMQA
FRKAIGVRIKEEAEVIEGEVVEVQIDRPAVAGAASKTGKLTLKTTDMETVYDLGAKMIEA
LGKEKVQSGDVIAIDKASGKITKLGRSFARSRDYDAMGPQTKFVQCPEGELQKRKEIVHC
VTLHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEV
HMLDIECFSFLNRALENDMAPILVVATNRGITTIRGTNYRSPHGIPIDFLDRLLIISTQP
YKEEEIRNILDIRCQEEDVEMSDDAKVLLTKIGVNTSLRYAIHLITSAALACQKRKGKAV
EVEDITRVYNLFYDVKRSTQYLMEYQSQYMFNEVSAGEAEEDETAAMVS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggggagttgaaaatctcagagatgcgtgacctaacccgtatagaacgcata
ggggcacactctcatatcagaggtctcggcctcgattcttcactcgaacctcgattaagc
tctgaaggtatggtaggtcaaattccagctcgaaaagctgccggaatcatggttaaaatg
gttcaacaaggtaaaattgcgggtcgtgcactgctccttgcgggtcaacccggaactggg
aagacagctatagctatgggtatggctaaatcgttagggcaagaaaccccttttgctatg
cttgctggtagcgaactttattcacttgatatgtcgaaaactgaagcgttaatgcaggct
tttcgtaaagcaattggtgtgagaattaaagaagaagctgaagttattgaaggtgaagtt
gtggaagtacagattgataggccggcggtggctggagctgcgtcgaaaacggggaaattg
acgttgaagactactgatatggagacagtttatgatttgggggcgaagatgattgaggct
ttagggaaggagaaagtacagagtggggatgttattgctattgacaaggcttctgggaag
attacgaagttggggaggtcgtttgcgaggtcgagggattatgatgctatgggacctcag
actaagtttgtacaatgtcctgaaggggagctgcagaagcgcaaggagattgtacattgc
gttacccttcatgaaattgatgtcataaatagcagaacacagggatttttagcactgttt
acgggtgatactggtgagattcgtgctgaagtgagagaacaaatagataccaaggttgca
gagtggagggaggaaggaaaggcagagattgtgcctggtgtcctcttcattgacgaagta
catatgcttgacattgagtgtttctctttcctaaaccgagctctggagaatgacatggca
cctatattggttgttgctacaaatagaggcattactacaatccggggaacaaactacaga
tccccacatgggattccaattgactttcttgatcgcctgctcatcatctctacgcaacct
tacaaagaggaagaaattcgcaacatcctggacatcagatgccaagaggaggatgtagaa
atgtctgacgatgcaaaagttttattgaccaagataggggtgaatacttctttgagatac
gccatccaccttatcacttctgcagcattggcctgccaaaagcgaaaagggaaggctgtt
gaagtggaagatattactcgagtctataatctgttttatgatgtgaagagatccacacag
tacttgatggagtatcagagccagtatatgtttaacgaagtgtcagcaggagaggccgaa
gaagatgaaactgctgcaatggtgtcctaa
DBGET
integrated database retrieval system
