Solanum stenotomum: 125858591
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Entry
125858591 CDS
T08385
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125858591
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125858591
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
125858591
NCBI-ProteinID:
XP_049394375
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Position
3:complement(9495595..9498137)
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AA seq
435 aa
AA seq
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MGLTKRNLFLFFVLVVLVVSIEAHIKEFDEVWKKRAQQAKKAARHAYNPNPNIVADHLNY
QVDKAVRGSNSRRRDLHRYSGKCMATNPIDQCWRCDPNWARNRMKLTDCVLGFGRKTTGG
KGGKIYVVMDNSDNELVNPKPGTLRHAVIQPEPLWIIFAKNMVIRLNQELIMTSNKTIDA
RGRQVHIAHGGGLMLQFVHNVIISNLHIHDTKAGSGGLIRDSVSHYGYRSKSDGDGISIF
GSTNVWIDHISMSNCQDGLIDAVEGSTAITISNCHFTKHNDVMLFGASDTASGDSVMQIT
LAFNHFGHGLTQRMPRVRWGFVHAVNNDYTHWLMYAIGGSMHPTILSQGNRFIAPPNPNA
KEVTKRDYAPENVWKNWVWKSQGDLMMNGAFFVESGDPKHAFLKGPDMITSKPGSFVSSL
TRFSGSLKCIEGRPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggattgacaaagcgtaatttgtttttgttctttgttttggttgttctagttgttagc
attgaggcacatattaaggagtttgatgaggtgtggaagaagcgagcccagcaagcaaag
aaggccgctcgacatgcctataatcctaatcctaatattgttgctgaccatcttaactac
caagttgacaaggctgtacgaggcagcaatagcagaagaagggacctgcacaggtacagc
ggaaaatgcatggctactaatcctatagaccagtgctggaggtgtgatccaaactgggct
cgaaaccgcatgaaattaacagattgcgtccttggctttggccgcaagacgacgggaggc
aaaggtggaaaaatctatgtggtaatggacaactcagacaacgaattagttaatcctaag
ccgggcacattgcgccacgctgtcatccagccggagccactttggattatatttgctaag
aacatggtaattaggcttaaccaggagcttatcatgacaagcaacaagacgattgatgct
cgaggaaggcaagttcacattgctcatggtggtggccttatgttacagtttgtacacaat
gtgattattagtaaccttcacattcatgatactaaggctggtagtggtgggttaattaga
gactctgtcagtcattatggttatcgatcgaaaagtgatggtgatggaatttcaatcttt
ggatcaacaaatgtttggatcgatcacatttccatgtccaattgtcaggatggtctcatt
gatgctgttgagggttccactgccattaccatttccaattgccatttcaccaagcataat
gatgtcatgttgtttggtgccagtgatactgcctcaggagactctgttatgcaaatcaca
cttgcattcaatcactttgggcacggtttgacgcagaggatgccgagagttagatgggga
tttgttcatgctgtcaacaatgattacacacattggcttatgtatgctattggaggaagc
atgcatcccaccatccttagccaggggaatcgttttatcgctcctccaaatcctaacgcc
aaagaggtgaccaaaagggactatgcacccgagaatgtttggaagaattgggtgtggaaa
tcacagggagatcttatgatgaacggggcattcttcgtagaatctggagatccaaaacat
gcattcttgaaaggtcctgatatgatcacctccaagccaggatcattcgtgagcagcctg
acgcgtttttcaggctctctcaaatgcattgaggggaggccttgctag
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