Solanum stenotomum: 125858599
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Entry
125858599 CDS
T08385
Name
(RefSeq) agamous-like MADS-box protein AGL8 homolog
KO
K09264
MADS-box transcription factor, plant
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125858599
Transcription factors [BR:
sstn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
125858599
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
Spectrin_Anc-1_2
DUF2071
FliD_C
Exonuc_VII_L
DUF1192
ALMT
FapA
Phage_scaffold
Motif
Other DBs
NCBI-GeneID:
125858599
NCBI-ProteinID:
XP_049394383
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Position
3:7707842..7714866
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AA seq
247 aa
AA seq
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MGRGRVELKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYSTD
SCMERILERYERYSYAERQLNATDIETPGSWTLEHAKIKARLEVLQRNQKHYAGEELDTL
SMKELQNLEHQLDSALKHIRSRKNQLMHESISELQKKDKALQEQNNNLSKQVKEREKEMA
QQTPWEQQSHDHLNSSSFVLPHPFNNLHMGEAYPTAGDNGEVEGSSRQQQQDSSSVMPPW
MLRHLNG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaggaagagtagagttgaagagaattgagaacaaaatcaatcgtcaagtaact
ttttcaaagaggcgatctggtttgctgaaaaaagctcatgagatctctgtgctttgcgat
gctgaagttggactcattgttttttcaactaaaggaaaactctttgagtattccaccgac
tcttgcatggaaaggattcttgaaaggtatgaaaggtactcatatgctgaaaggcagctt
aatgctactgatattgaaaccccggggagctggactttggaacatgctaagattaaggcc
agacttgaggttttgcaaagaaaccaaaagcattatgcaggagaagagttggacacattg
agtatgaaagagcttcagaatctggaacaccagctcgattctgctcttaaacacattcga
tcaagaaagaaccaattgatgcatgaatccatttctgagctgcaaaagaaggacaaggca
ttgcaagaacaaaataacaatctttcaaagcaggtgaaggaaagggagaaagagatggcc
caacagactccgtgggagcaacagagtcatgatcatctcaattcatcttcgtttgttttg
ccacacccctttaacaaccttcacatgggggaagcatacccaactgcaggagacaatgga
gaagttgaaggatcatcgcggcagcaacaacaagatagttcttctgtgatgcctccatgg
atgcttcgccatctcaacggttga
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