Solanum stenotomum: 125858601
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Entry
125858601 CDS
T08385
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125858601
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sstn04040
]
125858601
Ion channels [BR:
sstn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125858601
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Ion_trans_2
Babuvirus_MP
Motif
Other DBs
NCBI-GeneID:
125858601
NCBI-ProteinID:
XP_049394386
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Position
3:13815271..13830092
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AA seq
771 aa
AA seq
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MDTFEKDEMPMLSPSYPQSDGNDAFQNRRSTYRTRSASLSMPMSSMDSFENDSSYVGHTG
PLRSERRTSLVQMSGPLYIGREPENSFRPTPASVVHKPTLPTTEKYPSISSAERNGWRNN
DYTGKNEHLFKSGQLGMCNDPYCTTCPTYYHLKARQNNSKSSDIFDHKFHNVLYGDAKGW
AKRTCSFLHPYIPGVMNPHAKIVQKWNKFFVISCLFAVFIDPLFFFLLCVQKGNKCIMLN
WPLTTTIVILRSITDIIYLMHILLQFRLAYVAPESRVVGAGDLVDHPKKIAINYLSGYFV
VDFFIVLPLPQIIILLILPKSIASSGANYAKNLLRVAILLQYIPRLCRFLPLIAGQSPSG
FVFESAWANFFINLLTFVLSSHVVGSCWYLFGLQRVNQCLRDACRESKIARCVEFIDCGH
GNDYKNFWRDPTWDQWKNNSDAVACFTNGGFDYGIYEQAVNLTTEGSVVTRYVYSLFWGF
QQISTLAGNQVPSYFEWEVLFTMAIIGMGLLFFALLIGNMQNFLQSLDRRRLEMSLRRRD
VEQWMSHRRLPVELRRQVQEAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFKFIKKV
RIFALLDEPIIDAICERLRQKTYIAGSKVLYRGGLVDKMVFIIRGKMESIGEDGNVASLS
EGDACGEELLTWCLEHSSINRDGKKVRIPGHRLLSNRLVRCLTNVEAFTLRASDLEEVTN
LFARFLRSPRVQGALRYESPYWRGLAARRIQVAWRYRKKRQSRTDSSSPQH
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggacacttttgaaaaagatgagatgccgatgttatcaccatcatatccacagtctgat
ggaaatgacgcctttcaaaatcgacgttctacgtacaggacaaggagtgcatccctgtca
atgccaatgagctctatggattcatttgaaaatgatagtagttatgtaggccatactggt
cctttgagaagtgagaggcgaacttcattggttcaaatgagtgggccattatatattggt
cgcgagcctgagaatagctttcggcccactcccgcttcagtagtgcataaaccaactctg
cctacaacagaaaaatatccttcaattagcagtgcagaacgaaatggctggcgtaataat
gactacactgggaaaaatgaacatctctttaagtctggacaactgggcatgtgcaacgat
ccgtattgcacaacatgtccaacctattaccatttaaaagcacggcaaaataattcgaag
tcttcagatatatttgatcacaagttccataatgtgctgtatggagatgccaaaggatgg
gcgaagagaacttgttctttcttgcatccatatattcctggcgtcatgaatcctcatgcg
aagattgtccagaagtggaacaaattttttgtcatctcatgcctatttgcagtatttatt
gatcccctgttcttctttttgctttgtgtccaaaaggggaacaaatgcataatgctaaat
tggcccctcacaacaactattgtgattttgaggagcatcactgatatcatctacttaatg
cacatccttcttcagttccgattagcttatgttgcccctgaatctagggtggtgggagca
ggtgacctggttgaccaccctaaaaagattgctataaactatctgtcgggatactttgtt
gttgacttctttatcgtattaccacttcctcagatcatcatattgctgattttacccaag
tctattgcatcatctggggcaaattacgcgaagaatctactgagggttgctatactactc
cagtacattcccaggttgtgcaggtttttgcctttgatagctggccagtctccaagtggt
tttgtatttgagtctgcatgggcaaattttttcataaatcttctcacttttgttttatca
agccatgtggtgggctcatgctggtatctttttggtttacagagggtgaatcaatgtctt
cgagatgcttgtcgtgaatcaaagatagcgaggtgtgtggaattcatagactgtggtcat
ggcaacgactacaaaaatttttggagggatccaacgtgggatcagtggaagaacaattct
gatgcagttgcttgttttactaatggaggttttgactatggaatctatgaacaagctgtt
aacctaaccactgaagggagtgttgtcacaagatatgtgtactcattgttttggggattc
cagcaaattagtacactagctggcaatcaagtcccaagttattttgagtgggaagttttg
ttcacaatggctatcatcggaatgggactcctgttttttgccctcctgattggaaacatg
caaaactttctgcagtctctagatcgcaggaggttagaaatgtctctgagacgtcgtgat
gttgaacaatggatgagccataggcgcttgccagtagaactgagaaggcaagttcaagag
gcagagagatataactgggcagctacccgaggggtcaatgaagaaatgctactagagaat
cttcctgaagaccttcaaagagatataaggagacatctttttaaattcatcaaaaaggtt
cgaatatttgcacttctagatgaacctattatagatgccatctgtgagagattgagacag
aaaacatacatagcaggaagcaaagttttataccgtggtggtctggttgacaagatggtt
ttcataattcggggtaagatggaaagcattggagaagatggaaatgtggcctccttgtct
gaaggggatgcctgtggggaagaactcctcacatggtgccttgagcattcttctataaac
agagatgggaaaaaggtcagaattccaggacacagattgctgagcaacagactagtcagg
tgcctaacaaatgttgaagcatttacattacgagcttcagatcttgaagaagtcactaat
cttttcgcaaggttcttgaggagtccacgtgtccaaggtgccctaaggtatgaatctcca
tattggcgagggctggcagcaaggcggatacaagttgcctggagatacaggaagaaacgt
caaagccgaacagactcttccagcccccaacactaa
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