Solanum stenotomum: 125858602
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Entry
125858602 CDS
T08385
Name
(RefSeq) transcription factor PRE1-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125858602
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125858602
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Ortholog
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GFIT
Motif
Pfam:
bHLH_ILI
HLH
Syntaxin_2
CENP-F_leu_zip
CaMBD
PUMA_CC
COG3_N
RmuC
bZIP_1
PRC2_HTH_1
FlxA
Dioxygenase_N
PspB
Motif
Other DBs
NCBI-GeneID:
125858602
NCBI-ProteinID:
XP_049394388
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Position
3:complement(42115163..42119793)
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AA seq
96 aa
AA seq
DB search
MSSRRSRQSSSSSSPGSSRISDDQIIELVSKLHQFLPEIQTRRSNKASATKVLQETCNYI
RSLNREVNDLSDRLSQLLSTIDTESPEAAIIRSLIM
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagaaggtctagacagtcgtcatcatcatcatcaccaggttcttctaggatt
tcagatgatcaaattatcgaacttgtttccaagttgcaccaatttcttcctgagattcaa
actcgtcgctccaacaaggcatcagcaacaaaggtgcttcaagaaacatgtaactacatt
cgaagcttgaacagagaagtgaatgaccttagtgatcgactttctcagttgctatccaca
atagatacagagagtccagaagctgcaattattcgtagtttaataatgtga
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