Solanum stenotomum: 125858622
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Entry
125858622 CDS
T08385
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125858622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125858622
Spliceosome [BR:
sstn03041
]
Common components
Common spliceosomal components
SR proteins
125858622
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
SET_assoc
DUF2129
PHM7_cyt
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
125858622
NCBI-ProteinID:
XP_049394408
LinkDB
All DBs
Position
3:complement(20633374..20636611)
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AA seq
397 aa
AA seq
DB search
MRPIFCGNFEFETRQPELERLFKRYGKVDRVDMKSGFAFVYMDDERDAEDAIQGLDRIEF
GRKGRRLRVEWSKEERSRKPEGSKKSSSSFRVSKTLFVINFDPYNTRTRDLERHFDQYGK
ILNIRIRRNFGFIQFETQEDATRALDATNMSKLMDRVITVEYAIKDDDDRKNEYGPGKTY
NQSPRRGYDRGRSRSPRGRDRLSPDYGRGRDRPSPDYGRGRDRPSPDSGRGRDRPSPDYG
RGRDRPIPDFGRGRDRPSADFGSGRDRLSPDYGRGPSQSPKHRERNSEYGRGHSPAVGKE
RNLGHGNVRSPSPRRERTGPGNGLMSSQLKNRSPGYGDRPSPSPQRERRDKYSLDGYNRG
SSPGPKLEPVGSPVRDGRGSSERCRSRSPPARERSRS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaattttctgtggaaactttgagtttgaaaccagacagcctgagctggaaagg
cttttcaaaagatatgggaaggttgatagggtggatatgaagtctggttttgcttttgtt
tatatggatgatgaaagagatgcagaggatgctattcaagggcttgaccgaatagaattt
ggcaggaagggacggaggcttcgtgttgagtggtcgaaggaagaacggagcaggaagcct
gagggttctaaaaaatcttcatcaagcttcagagtttccaagaccttgtttgtcataaat
tttgatccatataatactaggacaagagatctggaaaggcactttgatcaatatggaaaa
atactcaatataaggatccgaaggaattttggatttattcaatttgaaacacaggaggat
gccactagagccctggatgctacaaatatgagtaagctgatggaccgagttatcacagtg
gagtatgcaatcaaagatgatgatgataggaaaaatgaatatggtcctggtaaaacctat
aatcaatcacccaggagaggttatgaccgaggccgatctcgtagtccacgtggaagagat
aggctgagtccagactatggtcgtggccgagatcggccaagtccagactatggtcgtggt
cgagatcggccaagtccggactctggtcgtggtcgagatcggccaagtcctgactatggt
cgtggtcgagataggcctattcctgactttggtcgtggtagagatcggccaagtgctgac
tttggtagtggtagagatcggctaagtcctgattatggtcgtggccctagtcaaagtcct
aagcacagggaaaggaattctgagtatggccgtggccatagtccagctgtaggaaaggag
agaaatcttggtcatgggaatgttcgcagccctagccctcgtagggaaagaacaggtcca
ggaaatggtcttatgagcagtcagctgaaaaacagaagtcctggttatggtgatagaccc
agtcctagtcctcaaagggagaggagagataaatatagcctggatggttataatcgtggc
agcagcccaggtcctaaacttgaaccagtaggaagtcctgtacgtgatgggaggggaagt
tcagagcgatgcaggagtcgttcacctccagctcgggaaagatcgcgctcctga
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