Solanum stenotomum: 125859134
Help
Entry
125859134 CDS
T08385
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00600
Sphingolipid metabolism
sstn01100
Metabolic pathways
sstn04382
Cornified envelope formation
Module
sstn_M00094
Ceramide biosynthesis
sstn_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125859134
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125859134
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sstn01007
]
125859134
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
125859134
Amino acid related enzymes [BR:
sstn01007
]
Aminotransferase (transaminase)
Class II
125859134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
125859134
NCBI-ProteinID:
XP_049394807
LinkDB
All DBs
Position
3:complement(61469119..61472932)
Genome browser
AA seq
321 aa
AA seq
DB search
MGYVTNSAVLPVLIGQGGLIISDSLNHNSIVNGARGSGATIRVFQHNKPSHLERVLRENI
AEGQPQNHRRWTKIIVVVEGIYSMEGELCKISEIVAICKKYKAYIYVDEAHSIGAVGKTG
KGVCELLGIDTANVDIMMGTFTKSFGSCGGCIAGSKELIEYLKYTCPAHVYAISISPPAA
QQIISAIKVLLSEDGSKRGAQKIAHLRENSNFFRSELQKMGFDVLGDYDSPVMPIMLYNI
AKLPAFSRECLKQNVAVVVVAFPATPLLLARARICISAAHSKEDLIKALEVITRVGDLLG
IKYLSTTPVDINRLGDSSHLS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggttacgtaacaaactcagctgtgcttcctgtcttgataggacagggaggtttgatt
attagtgattctctaaatcacaactctattgtcaatggagctagaggatctggagccact
attcgtgtttttcaacataataaaccatcgcatttggagagagttttacgagagaatatt
gctgagggacagccccaaaatcatagacggtggactaagataattgttgtggtggaaggc
atatatagcatggaaggggagctttgcaagatttcagagattgttgccatatgcaagaag
tacaaggcatatatttatgtggacgaggctcacagcattggagcagttggtaaaacagga
aaaggggtatgtgagctcttgggaattgatactgcaaatgtggatattatgatgggaact
ttcacaaagtcatttggatcctgtgggggttgtattgcaggatccaaggaactaattgaa
tatttgaagtacacttgtccagcgcatgtatatgcaatatccatatcacctccagctgct
caacaaatcatttctgctattaaggttttgcttagtgaagatggttcaaaaagaggagct
caaaaaatagcacacctacgtgaaaatagcaacttcttccggtctgaactgcagaagatg
gggtttgatgttttgggagactatgattcacctgtgatgcccataatgctctataatatt
gcaaaattaccagctttttcacgagagtgtctgaaacaaaatgtagccgttgtggtagtt
gcttttccagccacccctttacttttggccagagcacgcatatgtatttctgctgcccac
tcaaaggaagatctcatcaaagcattggaggttatcaccagagttggtgatttattgggt
ataaaatacttgtctactaccccagtggatataaatagactaggtgattcttctcatctg
tcctaa
DBGET
integrated database retrieval system
