Solanum stenotomum: 125859320
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Entry
125859320 CDS
T08385
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
sstn
Solanum stenotomum
Pathway
sstn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125859320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125859320
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125859320
mRNA degradation factors
5'-3' decay
Decapping complex
125859320
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
125859320
NCBI-ProteinID:
XP_049395002
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Position
1:93686906..93689863
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AA seq
218 aa
AA seq
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YSEFEELEAVPSMLVMDGPLEPSSTTSNTADVPDDRSFVNFFSNVMRIGSGPNATVQGQS
YDSTAVVLPSPLPPPAVPPSSAPALSQSPLSTSSTLMPTVDAPEPDTSARMSSNLVKPSS
FFGPPPSSSPLMPPVSSSVPTAPPLHSPGNLQRRYGAPLLQPFPPPNPPPSLTPTSAPSP
NNGHVINRDKVREAFLMLVQDDQFIDMVYRALVNAHHT
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
tacagtgaatttgaagagctggaagcagttccaagcatgttggtaatggatggtcccttg
gagccatcatctactacatcaaatactgcagatgtcccagatgatcgttcctttgtgaat
ttcttcagtaatgttatgagaattggtagtggtccaaatgctacagttcagggacagtcg
tatgactcaactgcagtagtcctaccttctcctcttcctcctcctgctgttcctccctct
tcagcacctgcactgtctcaatctcctctttctacatcttcgactttgatgcctaccgtt
gatgctcctgaacctgataccagtgctagaatgtcttcaaatcttgtgaagccatcatca
ttctttggtcctcctccttcctcttctccactgatgcctcctgtttcttcatctgtgcct
actgctcctccacttcattcccctgggaatctacaacgccgttacggagctcctttgctt
cagccatttcctcctccaaatccgcctccatctctcactcctacttctgctcctagccca
aacaatggacatgttattaacagagacaaagtgcgggaggcatttttgatgcttgttcaa
gatgaccaattcattgacatggtataccgcgctcttgtgaacgctcatcatacatga
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