Solanum stenotomum: 125859494
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Entry
125859494 CDS
T08385
Name
(RefSeq) structural maintenance of chromosomes protein 2-1-like
KO
K06674
structural maintenance of chromosome 2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125859494
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
125859494
Condensin II
125859494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
FKBP15
AAA_23
AAA_29
APG6_N
DUF4200
MscS_porin
CCDC39
Motif
Other DBs
NCBI-GeneID:
125859494
NCBI-ProteinID:
XP_049395220
LinkDB
All DBs
Position
3:21889366..21903483
Genome browser
AA seq
1175 aa
AA seq
DB search
MHVKEICLEGFKSYATRTVVSGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS
NLQELVYKQGQAGITKATVSVVFDNSDRSRSPLGYEDCAEITVTRQIVVGGRNKYLINGH
LAQPNRVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEA
ALKTLEKKQSKVDEIDKLLDQEILPALEKLRKERMQYMQWANGNAELDRLKRFCIAYEYV
QAEKVMADAIQGLEGMKSKITEIDSNVGKIQEEVQEMEKRASELQAEKDANMGGEIKLLT
EKVDALSCDLVKESSVLKNQEDILKTEKKNCVKIKKNLEELKQSAEEKVAAVSKAEEGAS
DLKKRAEELSISLEAHEKEYQGVLAGKSSGNEEKCLEEQLADAKVEVGNAETELKQLQTK
INHCEKELKGKKTQLLSKREEAAAVENELNNGKKQVEKLQKALESLSYKEEQMDLLQCDR
SIEVEAIQKLKDEIRVLSSRLSNIDFTYSDPVKNFNRSKVKGVVAKLIKVKDSSAMTALE
VAAGGKLFNIVVDTEDTGKQLLQKGGLRKRVTIIPLNKIQTHPVPPRQQNAAARLVGKGN
AEVAISLVGYDEELKSAMEYVFGSTFVCKTVDAAREVAFSREVGIPSVTLEGDIFQPSGL
LTGGSRRGGGDLLRQLHALAEAQSKLSIHQKRLSEIDAKINQLIPLQRKFKDLKAQLELA
SYDLSLSQSRAEQNEHHKLGELVKKIEQELGEAKSGVEEKKLVYESCLAKVSCLEKSIHD
HAGNRESRLKDLENKIKTIKRQMQSSLKDLKGHDNERERLIMEMEAVKQEHASLESQLVS
LNKQIDDLASEVDSQKAKVASLQDDAGHAQSELNSARLKIKECDSQISSILKEQQRLQNK
ISETNLEKKKMENEVKRMEMEQKDCSLKVEKLIEKHAWIGSEKQLFGRSGTDYDFGSRDP
RDARETFEKVQADQSGLEKRVNKKVMSMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEEL
DEKKKETLKVTWEKVNRDFGSIFSTLLPGTMAKLDPPEGGSFLDGLEVRVAFGSVWKQSL
SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIV
VSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKNK
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcaaagaaatttgcttggaggggttcaagtcatatgcaacaagaacagttgtc
tcgggtttcgatccgtttttcaatgcaataaccggtttgaatgggtccgggaaatccaac
attttggactcaatttgctttgttttagggattacgaatttgcagcaggttagggcttct
aatctgcaggagttggtgtacaagcaaggccaagctggaattactaaagctacagtgtcc
gttgtctttgataattcggaccgtagtcgaagtcctttgggatatgaagattgtgccgag
atcacagttacccgtcagattgtagttggtggaaggaacaaatatctgatcaacgggcac
cttgcacagccaaatcgggttcagaatctttttcactctgtgcagctaaatgtaaacaat
ccacactttcttattatgcaagggcgcattacaaaagtcttaaacatgaaacctcctgaa
atcttgtctatgcttgaagaagctgctggtacaagaatgtacgagacaaagaaagaagct
gccctcaaaactcttgaaaagaaacaaagtaaagttgatgagattgacaagctcttagat
caggaaattcttcctgctttggagaagttgaggaaagagaggatgcagtatatgcaatgg
gcaaatggaaatgcagaattggacagacttaaacggttttgcattgcctatgagtatgtt
caagctgaaaaagttatggctgatgccatacagggtttagaaggtatgaagtctaagatt
actgaaattgatagtaatgtgggaaagattcaggaagaggtacaggaaatggaaaagaga
gcatcagaattgcaagctgagaaagatgcaaacatgggtggggagataaagcttttgact
gaaaaggttgatgctctttcatgtgatctggtgaaggagtcatctgtcttaaaaaatcaa
gaggacattctaaagactgagaaaaaaaattgtgtaaagattaaaaaaaatctcgaagaa
ttgaagcaatcagcagaagaaaaggttgccgctgtaagtaaggctgaagaaggagcatca
gacctcaagaaaagagccgaggagctttctattagtcttgaagcacatgaaaaggagtac
cagggtgtgttggctggtaagagtagtgggaatgaggagaaatgccttgaagaacaacta
gccgatgccaaagtagaagttggaaatgctgaaacagaactgaaacagttgcaaacaaaa
ataaaccattgtgagaaagagctaaaagggaagaaaactcagctattatcaaagcgtgaa
gaagctgctgcagtggaaaatgagcttaacaatgggaagaaacaagtggaaaagcttcaa
aaagctttggaatctctttcatacaaagaggagcagatggatttattacaatgtgatcgt
tccattgaagtagaggctatacaaaagttaaaagatgaaatacgtgttctttcctctcgt
ctgtccaatattgacttcacatatagtgacccagtgaagaattttaatagatcgaaggtg
aaaggcgttgtcgcgaaactcattaaagtgaaggatagttctgcaatgactgcgctagag
gtagctgctggagggaagttgtttaatattgtggtagacacagaagacacaggaaaacaa
cttctacaaaaaggcggtcttaggaagagagtgactattatacccttaaacaaaattcaa
actcatcctgttccaccaagacagcaaaatgctgctgctagactagttgggaagggtaac
gctgaagtggcaatttctctagttggatatgatgaagaactcaaaagtgcaatggagtac
gtatttggttcaacatttgtttgcaaaactgttgatgcggcacgagaggttgcttttagt
cgggaggttggaatacccagtgtgacacttgaaggtgatatttttcagcctagtggactt
ttaactggcggtagtcgaaggggtggtggtgatttattgagacaacttcatgctttggca
gaggcacaatcaaaactttctattcatcaaaagcgtctctccgaaattgatgccaagatt
aatcagctcattccccttcaaagaaaattcaaagatcttaaggctcagttggaacttgca
tcttatgatctgtctttgtcccagagcagggccgaacaaaatgagcatcacaagcttggt
gaacttgtaaaaaagatagagcaggagcttggagaagcaaagtcaggtgttgaagagaaa
aaacttgtctacgaaagctgtctggcgaaagtgtcatgtcttgaaaagtcaattcatgac
catgctggtaatagggagagcagactgaaagatctagaaaataagattaagactataaaa
cgtcagatgcagtcttcactgaaggacctaaaggggcatgacaatgaaagggagagactt
ataatggagatggaagctgtcaaacaggaacatgcatcccttgagagtcagttagtttct
ctgaacaaacagattgatgatcttgcatctgaagtggattcccaaaaggcaaaggttgct
tctttgcaagatgatgctggccatgcacagtcagaacttaactcagctcgtttgaagatc
aaggaatgtgattctcaaatctcaagcattctcaaggaacagcagcgacttcagaataaa
attagtgagaccaatcttgagaagaagaaaatggaaaatgaggtgaagcgcatggagatg
gaacaaaaagattgttccttgaaagttgagaaattaatagaaaaacatgcctggattgga
tctgagaagcaactgtttggaagaagtggtactgattatgattttggatctcgtgatcct
cgtgatgcaagggaaacttttgaaaaggttcaagctgatcagtcaggccttgagaagaga
gtgaataagaaggttatgtcgatgtttgaaaaagctgaggatgagtacaatgacttaatg
tcaaagaagaatattattgagaatgacaaatcaaaaattaaaaaggtgattgaagagctt
gatgagaagaagaaggaaacgcttaaagttacttgggaaaaagttaacagagattttgga
tccatattttctactttgttacctggcacaatggcaaagttggatccacctgaaggaggc
agcttcttagatggcttggaggttcgtgttgcatttggatcagtttggaaacaatcacta
tctgagcttagtggtgggcagagatctctacttgcactctctctcattctggctttgctt
cttttcaagccagccccactttatatcctggacgaggttgatgcagctcttgacttaagt
catacacagaacattggaagaatgatcaagagtcattttccacattctcagtttattgtt
gtatccttgaaagagggtatgtttaacaatgccaatgttctcttccggacaaaatttgtg
gatggtgtctcaacagtgcagagaacagttgcagctaaaaacaaatga
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