Solanum stenotomum: 125859517
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Entry
125859517 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125859517
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125859517
Spliceosome [BR:
sstn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125859517
Complex C
U4/U6.U5 tri-SnRNP related factors
125859517
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
MIF4G_like
Motif
Other DBs
NCBI-GeneID:
125859517
NCBI-ProteinID:
XP_049395241
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Position
3:complement(1140878..1142674)
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AA seq
516 aa
AA seq
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MEESLEYQKKSWIALKKSINGLLNKINKANIKHIIPELFEENLIRGRGLFCRSIMKSQLN
SAIFTDVFAALIAVVNTKFPQIGELLCKRIILQLRRAYNNNNKPQMLASVKFIGHLVNQQ
VVHELVALELVTLLLEKPTDDSVDVAVGFVKECGSMLQDLCPLGLHAIFERFRGILHEGE
IDKRVQFLIEDLFALRKHKFQPAVPPELDLVEEEDRVTHEISLGDKVDEQIELDVFKPDP
NFVENENKYEQLQKRILGGGDQDEESEDDDESKDEGEQQMKIEDETETNLINLRRTIYLT
IMSSAEFEEAGHKLLKIKLEPGQEMELCIMLLECCSQEKTFLHYYALLGQRLCMINKVHQ
KNFEKSFMQQYSMIHQLETNKLRNVAKFFAHLLGTDALPWHVLAYLRLTEEDTTSSSRIF
IKILFQELSGHLGIRMLNERLSDPSMQESFESIFPKDNPKNMRFAINFFTSIGLGGITEN
LRDYLKNMPRLILQQDKRVSRSSESDDDRPRKRRRS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagcctagagtaccaaaagaagagttggattgctctaaaaaagagcataaat
gggctgctcaataaaatcaataaagccaacataaaacacatcattcctgaattgtttgaa
gagaatttaattcgtggtaggggcttgttttgcagatcaattatgaaatcacaattgaat
tctgctattttcacagatgtttttgcagcattgatagccgttgttaacacaaaattccca
caaattggtgaacttttgtgtaagaggatcattctgcaattgcggagagcctataacaat
aataataaacctcagatgttagcatctgtaaaatttattggtcatcttgtcaatcagcaa
gttgttcacgaacttgtagctttggaattagttactcttttactcgagaaacctactgat
gatagtgttgatgttgctgttggtttcgttaaggaatgtggttcgatgcttcaggatctg
tgtcccttagggttgcacgctatttttgagagattcagaggaatacttcatgaaggagaa
atagataaaagggttcaattcttaattgaagacctttttgcattgcggaaacacaagttt
cagccagctgttcctccagaacttgaccttgttgaggaggaagatcgagtaacacatgaa
atctctctcggagacaaggtggacgagcaaattgaattggatgttttcaagccagatcct
aattttgttgaaaatgaaaataagtatgaacaactacagaagaggattctaggtggtggt
gatcaggacgaagaatctgaggatgacgacgaatctaaggatgagggcgagcaacagatg
aaaattgaagatgagacagagacaaacttgatcaatcttcggaggacgatttacttaacg
attatgtcaagtgctgagtttgaagaagcagggcacaagctgttgaaaatcaaactagag
cctggtcaggagatggagttatgcataatgttattggagtgctgcagtcaggagaagact
tttctccattactatgcacttttggggcagcggctatgcatgatcaacaaagttcaccag
aagaattttgagaaatcattcatgcaacaatactcgatgatccaccaacttgaaactaat
aaactgcgtaatgtggcaaagttttttgctcatttactaggcactgatgcactgccttgg
catgttttggcttatttaagattgacagaagaggatactacatcttcttctcgtatattc
attaaaattttattccaggagttgtcagggcaccttggcatccgtatgctgaatgagcgt
cttagtgacccctcaatgcaagagtcatttgagtcgatatttccaaaggataatcctaaa
aatatgaggtttgctatcaacttcttcacatccattggtctaggtgggataactgaaaat
ctgcgagactatctgaagaacatgccaaggcttatcttgcagcaagacaaacgtgtttcc
agatcaagtgaatcagatgatgatcgtccaaggaagaggaggagaagttag
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