Solanum stenotomum: 125859780
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Entry
125859780 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125859780
04121 Ubiquitin system [BR:
sstn04121
]
125859780
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125859780
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125859780
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125859780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-Nse
Anti-TRAP
zf-RING_5
zf-RING-like
DZR
zf-RING_Vps41
zf-RING_10
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
125859780
NCBI-ProteinID:
XP_049395549
LinkDB
All DBs
Position
3:complement(13476059..13479693)
Genome browser
AA seq
387 aa
AA seq
DB search
MSSAGAVGGGGASGNQPQNYYCYQCEQTVTITPSPNSELSCPNCNGTFLEESETAPPSNP
NPNTHPFFSSATTDDLPFGGGFPIVFSSNAASPAGGAVGFDDLSALFGGMAGGSAALPGR
SPNQFDPFAFLNNYFSSMRGGNIQLIFENHPDGGGGGAGGDFRIPGNLGDYFLGPGLEQL
IQQLAENDPNRHGTPPAAKSAVAGLPDIKITEELLDSDSSQCAVCKDTFELGMEAKQIPC
KHIYHKDCIMPWLEMHNSCPVCRYELPTDDPDYENRKTSQQQTANTSNTHTNTSNNNTNN
NSTGVMFGGLEGGGDQDNSQTPSTGERRLRIPLQWLFRGLGSPAETSNSGGASNDANNHN
NNNTSNNAPSGESNPGSGGQPRQEDLD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggccggagcagttggtggcggaggcgcttccggaaatcaaccacagaattat
tattgctaccaatgtgaacagacagttaccattacgccatcaccaaattcagagctctca
tgcccaaattgcaacggtacgtttttagaagaatcggaaaccgcaccaccttccaaccct
aatcctaatactcatcccttcttctcctccgccactaccgatgacctacctttcggaggt
ggatttccgattgttttctcttcaaacgctgcttcacctgccggtggtgctgtcggtttt
gatgatctttctgctttatttggaggtatggctggtggttccgctgctttaccaggtcga
tcccccaatcaatttgaccctttcgctttcctaaacaactattttagtagtatgaggggt
gggaatattcagttaatcttcgagaatcatcctgatggaggcggtggtggagctggtggt
gattttaggattccggggaatctaggtgactattttctagggcctgggcttgagcaattg
attcaacagcttgcggaaaatgatccaaatcgtcatggtacacctccggctgcaaagtcg
gctgttgctgggcttccagatattaagatcactgaggagttgttggattctgattcatct
caatgtgcagtttgtaaagatacttttgaactcggcatggaggcgaagcagataccttgc
aaacatatataccacaaggattgtataatgccatggctggagatgcacaattcttgccca
gtgtgtcgatatgagctgcctactgatgatcctgattatgagaataggaagacatcacag
cagcagactgccaatactagtaatacgcataccaacactagtaacaataataccaacaac
aacagtactggtgtgatgtttgggggtttagaaggtgggggagatcaggacaattctcag
acacctagtacaggggagaggaggcttaggataccattgcaatggcttttcaggggactt
ggatcacctgctgagacgagcaacagtggaggggcaagcaatgatgctaacaatcacaac
aacaacaatacgagcaacaatgctcctagtggggagtctaatccaggttctggagggcag
ccgaggcaggaggatctcgattaa
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integrated database retrieval system
