Solanum stenotomum: 125859864
Help
Entry
125859864 CDS
T08385
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125859864
03036 Chromosome and associated proteins [BR:
sstn03036
]
125859864
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125859864
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125859864
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125859864
microRNA pathway
RISC loading complex
125859864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
125859864
NCBI-ProteinID:
XP_049395663
LinkDB
All DBs
Position
3:11073462..11078334
Genome browser
AA seq
870 aa
AA seq
DB search
MKAEPGKGCGSVSERLMPNFNQMNRPRPGVKGKKIHLLTNYFRVCFQGGISQLYSYNVNV
LYENGDPVTGSTLIRKVIHKLWEIYSSELGEQAFASDGQQSLFTTSLLPQKKLDFTVVLD
AATSKRCKTDGSLSGDGDLSEGDQKRQKIISRFKTFRVQINFVSIIPFKTMPDGKHGVKS
GNNEVLIALDTILQHSNAKRNCLLLRQSYFPNEMKNFMDLTGGILGCRGFHSSFQSVQGG
LYFNLDTSTTTLIQPGPLVNFLMANQNVETPFKIDWTKAKILKNLRIKLLHSNREHKITG
LSNRTCKDEKFLLQLRGSNNQNDNVQTVETTVYEYFVRRRGIELGYSSNLPCINVGSQRK
AQFIPVELCSLVPLQRFKKELSLHQRSLLVNKSSQMPIELMKHLNEELKANDYNTDPMLR
ACGISINKSYTEVEGRVISPPQLRVGNKENLASRFSRWSFNGKKFVDPKSIEFWAVVNFS
TGRDIRAFCIEMAKLGAMRGKHIHPPSFVFEENTKHKKKPGSVRVDKMFEQIIPKFRKDP
PRFLLCFLPAKFSNLYGPWKKKCLMTFGIRNQCIAKNKVDETYLANVMLKINAKLGGLNS
MLLAEVSQTIPLVSKVPTMILAMGVTHAPSSRSDLPSVAAVVGSRQWPMISYYRASTCIQ
PPKTETIHSLFRPVSDREDSGMIRELLMDFHASSGKRKPEQIIIFRQGLSESQFKHVISE
MEEIIKACKFLDETWSPKFTLIVAQRRHHTKLFQANSSDNIPPGTVVDTKICHPLYNNNF
YICAHAARVGTSRPIHYFVLLDEIGFSSDSVQELVHCLCYVSQRCTSAIYEVAPIRYARL
VSAQMLEIMKTEGPELPMLHKNVCDTMFFC
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgaaccagggaaaggttgcggatcagttagtgagagattgatgccaaacttt
aaccagatgaacagacctcgtccgggggtcaagggaaagaagatacatctgctgacaaat
tattttagagtatgctttcaaggtggcataagtcaactatattcatacaatgttaatgtc
ctatatgaaaatggggaccctgtaactggaagcaccttaattagaaaagtgattcataaa
ctctgggagatatacagctccgagttaggagagcaagcatttgcttctgatgggcaacag
agcttgttcacaactagtcttttaccacagaagaagctagatttcacagttgtacttgat
gctgcaacatcaaaaaggtgcaagacggatggcagccttagtggcgatggagacttaagt
gagggtgatcaaaagaggcagaagatcatatcccgattcaaaactttcagagtacagata
aactttgtttccatcatcccctttaagacaatgcctgatggaaagcatggagtaaaatca
ggaaataatgaagttctgatagcattagacacgattttgcaacactctaatgcaaaaagg
aactgccttctgctccgccaatcgtacttccccaacgagatgaagaacttcatggacttg
actggtggtatccttggatgccgaggttttcattcgagtttccaatctgttcaaggtgga
ttatatttcaaccttgatacatctactacaacacttatacagccaggtccactagttaac
tttttaatggccaaccaaaatgtggaaactcccttcaaaatcgactggactaaggcaaaa
atcttgaaaaatctcagaattaagctattacactccaatagagaacacaaaatcactgga
cttagcaacaggacatgtaaagatgagaagtttcttctgcagctgaggggatccaataat
caaaatgacaatgtccagactgttgagacaactgtttatgaatattttgttaggagacgt
ggaatagaactcggttattcatcaaacttgccatgcatcaatgtaggaagccagcgcaaa
gctcagttcattcctgttgagctctgttcattggttcccttacaacgattcaaaaaggaa
ttatccttacatcaaagatccttattagtgaacaagtcgagccaaatgccgatagaactc
atgaagcatctaaacgaggaacttaaagccaacgactataacacagaccccatgctgcgc
gcttgtggaatctcaattaataaatcttatactgaagtagagggaagagttatatctcct
ccacagttgagagtgggaaacaaggaaaatcttgcttcaagattttcgcgctggagcttt
aacggcaagaagtttgtagatccaaaaagcattgaattttgggctgtggtgaacttctct
actggccgtgacatacgggctttctgcattgaaatggcaaaattgggtgcaatgagggga
aagcacattcatccaccatcatttgttttcgaagagaacactaagcataaaaagaaaccg
ggatctgttcgagtggacaagatgtttgaacaaataattccaaaatttcgcaaggatcct
cctcgattccttctttgctttcttcctgccaagttttctaatttatatggtccatggaag
aaaaagtgtcttatgaccttcggaattcgtaaccagtgcattgcaaagaacaaagttgat
gaaacttatcttgctaatgttatgttaaaaattaatgcaaaacttggtggtctgaattct
atgttattagctgaagtttcacagactattcccttagtttctaaagttcccacaatgatc
ttagcaatgggcgttacacatgccccttcttcacggtcagatttaccctccgttgctgca
gtggtcggttctagacagtggccgatgatttcttactatagagcatctacttgtatccaa
ccaccaaagaccgaaactatacattctctctttagaccagtttcagatagggaggactca
ggcatgatcagggagctcctaatggattttcatgcaagttcggggaagaggaagcctgaa
cagattattatattcagacaaggtttaagtgaatctcaattcaagcatgttattagcgaa
atggaggaaattattaaggcctgtaaattcctggatgagacttggtctcctaagttcact
cttattgttgcacaaagaagacatcacacaaagttgttccaagctaattccagtgacaat
attcctcctggcacagtcgttgatactaaaatttgtcatccgctgtataataacaacttc
tacatatgtgcacatgcggcaagagttgggactagcaggccaattcactactttgttttg
ttggatgaaatcggcttctcatctgatagtgtgcaggaactagtccattgtttatgttac
gtgtctcagagatgcaccagtgctatatatgaagtggctccgattcgttatgctcgtttg
gtttcagctcagatgttagaaattatgaagactgaggggcctgaactgccaatgttgcac
aaaaatgtgtgcgatacaatgtttttctgctga
DBGET
integrated database retrieval system
