Solanum stenotomum: 125859885
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Entry
125859885 CDS
T08385
Name
(RefSeq) regulator of telomere elongation helicase 1 homolog isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sstn03032
]
125859885
Enzymes [BR:
sstn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125859885
DNA replication proteins [BR:
sstn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125859885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
DEAD
ResIII
AAA_11
AAA_30
Motif
Other DBs
NCBI-GeneID:
125859885
NCBI-ProteinID:
XP_049395689
LinkDB
All DBs
Position
3:2874498..2889662
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AA seq
1040 aa
AA seq
DB search
MPIYKIRGIDVDFPYEAYDCQIAYMEKVIQSLQNRSNALLESPTGTGKTLCLLCATLAWR
KSLGGFSVRKSGRRDHISSSQQSDESSQSESSTLPSIVYASRTHSQIRQVVKELKRTNYR
PKMVVLGSREQLCIHEEVSQLRGKTQTNACHALCKKRKKRYCAHFSRVAEFMKINPSLGE
EPIDIEDLVNIGRSSGPCPYYVSRELHKTVDILFAPYNYLIDRGYRKSLNIQWTNSILIF
DEAHNLESLCADAASFDLSSGLLTACISEAKNCIDLSIERREMSSDKSCNPDNFAILRAL
LLKLEKKIGEVPIDSKELGFTKPGPYIYEFLADLNSTQKTANMLIDIIEEATVLLEEDTN
TTEDGKTNKSKSTVCRLESMGDILQQIFRDDGNPHAQYYRVHVQEVQGNGMDSFKGKGSR
TLSWWCFNPGIAMEQFSRLGVGSIILTSGTLSPMDSFAEELKLDFPVRLENPHVISDNQI
WAGAVPVGPSGYTFNSSYRTRDSIEYKQELGNAIVNFARVVPDGLLVFFPSYYILEQCIG
CWKTLGHSISMGSSTIWERICKHKLPVVEPRQSSLFPTAIEDYMAKLKDKSASGAVFFAV
CRGKVSEGLDFTDHAGRAVVITGIPFATRTDPKVRLKREFLDQQMALQPTGSKVLTGEDW
YTQQATRAVNQAVGRVIRHKHDFGAIIFCDERFTYSNRQSQISRWIQPHIKCHSKFGEVV
FSLTRFFRDGRIRGPTKLEMMLPDDKETVKSVGNSQSQLHFEKLLTSLVSSVDFPGSTNQ
LSSSVKQGNSPGRLEDILPANKSSLRSDKLAKILAVKHASNLLVPGRKDMPISNQKIIDL
TKHELADEPPKDVVAPCSTKRPRLALTGSDCQSDHFREPHDSPDCSSVAHHLLSESGFRY
LLNNKKSQYSDNQSTRNINLDRANLLEDERTSRKTAGLVDLQNEDGILSSAPCNNEEKGS
AFLVQVREKLTDTEYHEFVGYMKSLKSKAMKIGQVLQSITRLFSLPDRLPLLHRFKDYVP
AKYHSLYDQYLKRNHEVAHL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttacaaaattaggggaatcgatgtcgatttcccttacgaggcttacgattgc
cagatcgcttacatggaaaaagttattcagtcccttcaaaatagatctaacgcattgctt
gagagtccaactgggactgggaagaccttgtgtcttctttgtgccacattggcttggagg
aagagtttggggggtttctcagtccggaagagtggaagaagagatcatatttccagtagc
cagcagtctgatgagtcttctcaatctgaatcttcgacattaccgagtattgtatatgca
tcacgcacacatagccaaattcgacaagtggtgaaagagttaaagaggaccaactatagg
cccaaaatggtagtcttagggtctcgggaacaactatgcattcatgaagaagtgagtcag
ctgcgtggaaaaacacagacaaatgcctgccatgcactttgcaaaaaacgcaaaaaacgt
tattgtgcccatttttctcgcgttgcagagttcatgaagattaatcctagtctcggagag
gagcctattgacatagaggatttggttaacattggaagaagcagtggaccgtgtccatat
tatgtatcacgagaacttcacaagactgtggacatattatttgcgccttacaattatctt
attgatcgcggatacagaaagtctttgaatattcagtggacaaacagtatacttatattt
gatgaagctcataacttggaaagcttgtgtgctgatgcagcctcttttgacctttcttct
ggccttctgacagcttgcatctctgaagctaaaaattgtatagacctttcgatagaaagg
agggagatgtcaagtgacaaatcatgtaatcccgataactttgccattctcagagcactt
ctgttgaagcttgagaaaaaaattggtgaagtacccattgattcaaaagagttgggtttc
acgaagcctggaccatacatttatgagtttcttgctgatctaaatagcacacagaaaacg
gccaacatgctcattgatataattgaggaagcaactgtacttcttgaagaagatacaaac
actactgaagatggaaaaacaaacaagtcaaaaagcacagtctgcagattggaaagcatg
ggtgacattctacagcagattttcagagatgatgggaaccctcatgctcaatactatcgt
gttcatgttcaggaagttcaaggaaatggcatggattcctttaaaggcaagggatctagg
acactgagctggtggtgtttcaatccaggtattgcaatggagcagttctccagattaggt
gttggatctatcattttgacttctggcacattatctccaatggattcctttgctgaggaa
ttgaagttagattttccagtacgtttagagaaccctcatgttatatcagacaatcagata
tgggctggtgctgtacccgtgggcccttctggttatacattcaactcatcatacaggaca
cgtgattctattgaatacaagcaagagcttgggaatgccattgtcaatttcgctcgcgtt
gtaccagatggccttcttgtattttttccttcatattacattttggagcaatgcattggc
tgctggaaaactttgggacattcaatctcaatgggttcaagcacaatatgggaaaggata
tgcaaacacaagctgcctgtggttgaaccgagacaatcttcccttttcccaacggcaatt
gaagactatatggccaagttaaaggacaaatcagcatctggggctgtattttttgccgtc
tgtcgtggaaaagtgagtgaggggctggattttactgaccacgctggtagagctgttgtg
atcactggcatccccttcgccacaaggaccgatcctaaggttcgattgaaacgcgaattc
ctggatcaacagatggccttgcaaccaactggatctaaggtcctaacaggagaagattgg
tatactcaacaagcaaccagggcagttaatcaggctgtgggccgtgtcattcgtcataaa
catgattttggagcaattatattttgtgatgaaagattcacatactccaatcgtcagtca
cagatatcacgttggatacaaccccatatcaagtgtcattccaaatttggggaagtagtc
ttttcattgacacgcttttttcgtgatggaagaatccgtggccctacaaagctagaaatg
atgctaccagatgacaaggaaacagtaaagagcgtaggaaactctcagtctcaacttcac
tttgaaaagcttctcacctctctggtctcatcagtggattttcctggctctactaatcaa
ttgtcttcctcagttaagcaaggcaacagccctggtaggctggaagacatacttcctgct
aataaatcatctcttagatctgataagctagctaagattctggccgtaaaacatgcaagt
aatttattggtccctggacgaaaagacatgccaattagcaatcagaaaataattgacttg
acgaaacatgaattggctgatgaaccaccaaaagatgttgttgcaccttgttctacgaag
aggcctcggttagcattaacaggatctgattgtcaaagtgatcattttcgagagcctcat
gatagtcctgactgttcctcagttgcccatcacctgttgtcagaaagtggctttagatat
ttattgaataataagaagtcacagtactctgataaccaaagtacacgaaacattaattta
gatagagcaaaccttcttgaagatgagaggacatcacgaaagactgcagggttagttgac
ctgcaaaatgaagatggcattcttagctctgcaccttgcaataatgaggagaaaggatcg
gcttttcttgttcaggtcagggaaaagcttactgatacagaataccatgaattcgtcggg
tatatgaagtcgctcaagtctaaagcaatgaagataggccaagttcttcaatctatcaca
agattattttctcttcctgatagactacctctccttcacagatttaaggattatgttccc
gcgaagtaccattccttgtatgatcagtatttaaaaagaaatcatgaagtagctcacttg
tga
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