Solanum stenotomum: 125859973
Help
Entry
125859973 CDS
T08385
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125859973
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125859973
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125859973
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125859973
Spliceosome [BR:
sstn03041
]
Common components
Common spliceosomal components
SR proteins
125859973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
CoV_nucleocap
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125859973
NCBI-ProteinID:
XP_049395789
LinkDB
All DBs
Position
3:complement(16328154..16333143)
Genome browser
AA seq
218 aa
AA seq
DB search
MADSPRQRYSRSPSPWEEKSRSRSKSRSRSPPGSYSRPNERSRSRSRGREEVSNPGNTLY
VTGLSLRVTERDLEEHFSKEGKVKSVFLVMEPRSRISRGFAFITMDSMEDANRCIKHLNQ
SVLEGRYITVEKSRRKRARTPTPGHYLGLKNARDDGYRGDRGRYRDREDYGYRRSPRHSP
YRGGRDYSPRHSPYGGRSRRERSRSYSPYERSYPRGPR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgccaaaggtattcacgctctccttctccttgggaagaaaagtcg
agatctagatctaaatcaaggtctagatctccacctgggtcatattcaaggccaaacgaa
agatcaaggtcaagaagccgtggaagggaagaagtttctaatccgggaaacacactttat
gtgactggtttgtctttaagggtcacggaaagggacctggaggagcatttctcaaaggag
gggaaggtgaaatcagtttttcttgtcatggagccgcgttctcggatttctcgtggtttt
gcttttataacgatggatagtatggaggatgctaatcgttgcattaaacaccttaatcag
tcggttcttgaaggccgttacatcacagtggaaaagtctcggaggaaacgtgcaaggact
cctacgcctggtcactatctagggcttaagaacgcaagggatgacggttatcgtggagac
cgtggcaggtatagagatcgtgaggactatgggtaccgaagatctccaaggcattcacca
tatagaggtggacgagattattcacctaggcattcgccttatgggggaaggtcaagaagg
gagcgttctaggtcatattctccttatgaaaggagctatcctcgtggtcccagatag
DBGET
integrated database retrieval system
