Solanum stenotomum: 125859997
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Entry
125859997 CDS
T08385
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sstn
Solanum stenotomum
Pathway
sstn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125859997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125859997
03036 Chromosome and associated proteins [BR:
sstn03036
]
125859997
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125859997
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125859997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
125859997
NCBI-ProteinID:
XP_049395819
LinkDB
All DBs
Position
3:5501320..5509552
Genome browser
AA seq
1033 aa
AA seq
DB search
MEVELGTSEQLIVSQSQCKRRKISALDQILGENEADLPTLRSPDYFTDPCLSELAVRELM
SSGYCSKVENFTVGRFGYGFVKFSGETDVRGLDLDRIVKFSRHEVIVYEDENDKPPVGMG
LNKPAEVTLLLEIRSSKHYDVDSSRELVEKLRLRTERQGARFISFDPSNGEWKFFVQHFS
RFGLNDEEEDEDMIIDAVSPEVQDPADMNGRDVSDIDEETFLANTTDLSHSLPAHLGLDP
VKMKEMRMLMFPAEEEDIDDYHGVPFDRKPQFSKESSKSPLQHKFQRVSPPLTRKTPLAL
IEYKHGSFGSDSPGSILLTQQNKGVLLKTTKTEGFKLDVRQQTPISGTYSCNVVDAGLFM
GRSFGVGWGPNGVLIHSGAPVGSKDDQCLSSIINLEKVAFDQVARDENKKFREELVDLCF
DSTLHLHKEITHETKEFGEGPFALKLQRLVCDRLMLSDVCRSYICVIERQLEVPDLSPAS
RVLLMHQAMIWELIKVLFSTRQLSGKLKSLEDEDEEDMIPDARETSSDVDPEALPLIRRA
EFSYWLQESVCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACLLSQ
AGGSMVNRSDVARQLDIWRVNGLDFNFVETERIRVFELVAGNIHRALHDVDIDWKRFLGL
LMWYQLPPETELPIVFRTYQRLLNEGKAPSPVPVYIDEGPIEVSMNWHAVKHSDLGYYLM
LLHANQEIDFSALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGAFSSNDLHVLDISFISQ
LLCLGQCHWAVYVVLHMPHREDCPYLQAALIREILFQYCETWSSQDLQRQFIEDLGIPSA
WLNEALATYFNYYSEFSKALEHFLECGKWQKAHTIFMTSVAHSLFLSEEHSEIWRLAASM
EDHKSEIEDWDLGAGIYISFYLLRSSFQEDSDTMNQDTIENKDNACADFISRLNNSLAVW
TNRLPVKARVVYSKMAEEICNLLLSDSSGSSSNEVQLSCYDTIFKAPIPEDTRAYHLQDA
VSLFTSYLSEVPS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgagttagggacttctgaacaacttattgtttctcaatctcaatgtaaaaga
agaaaaatttctgctttagatcagattttgggcgagaacgaagctgatttacctaccttg
cgatctcctgattattttactgatccatgcttgagtgaattggctgttagggagctaatg
agctcagggtattgcagtaaagttgaaaattttactgttgggaggtttggttacggattt
gtcaaattttctggggaaacagatgttagggggttggatttggatcgaattgttaagttt
agcagacatgaggtgattgtatatgaagatgaaaatgacaagcccccagttggcatgggg
cttaacaagcctgctgaagtaactttgctactggaaatacgatcctccaaacactatgac
gtggattcttctagagaactggtggagaaattaagacttagaacagagagacaaggagca
cgttttatttcgtttgatccatcaaatggagaatggaaattcttcgttcagcatttcagc
agatttggtttgaatgatgaggaagaagatgaagatatgataattgatgctgtgtctcca
gaagttcaagatcccgcggatatgaatggaagagatgtttctgacattgatgaagaaacc
ttcttagccaatacaactgatctttcacattctcttcctgcccatcttgggttagatcct
gtaaagatgaaagaaatgagaatgctgatgtttccagcagaagaagaggatatagatgat
tatcatggtgttccttttgatagaaaaccacaattcagtaaagaatcttcaaaatcccct
ttgcaacataagttccagagagttagtccacctttaactcgcaagactccattggctttg
attgaatacaaacatggtagttttggctcggactcacctgggtccattttgttgacccaa
caaaataagggtgtgcttctaaagacaacaaagactgaaggtttcaagctggatgtcagg
cagcaaacacctataagtggaacctactcttgtaatgttgttgatgcgggattgttcatg
ggtagatcctttggagttggctgggggcctaatggtgttcttattcattctggcgctcca
gttggtagtaaagacgatcaatgtttgtcctcaataatcaatttggagaaggttgcattt
gaccaagtagctagagatgaaaataaaaagtttagggaggaacttgttgatttgtgtttt
gattcaaccctccatcttcacaaggaaattactcatgaaaccaaagagttcggggaggga
ccctttgcgttaaagcttcaaagacttgtgtgtgatcgtctaatgctttcagatgtatgt
cggagctatatttgtgtcattgagaggcaattggaggttcctgacttatctccagcatcc
cgtgttcttctgatgcaccaagcaatgatttgggaattaataaaagtgcttttctcgaca
agacaattgagtgggaaattaaagtctcttgaagatgaggatgaggaagatatgatacct
gatgcaagagaaacttcttcagatgttgatccagaagcacttccattgataaggagagca
gaattcagctattggttgcaagagagtgtttgtcacagggtacaggaagaagtaagttct
ttgaatgattcaagtgatctacaacatatgtttttacttctaactggtcggcagctggat
gctgctgtggaactggcggcttctagaggagatgtgcggcttgcatgtcttcttagccaa
gctggtggttcgatggttaatcgttctgatgttgctaggcagcttgatatttggagagtg
aatgggttggacttcaattttgttgagacagagaggattagggtttttgagttggttgct
ggcaacattcatagagcattgcatgatgtagacattgactggaaaaggtttctggggttg
ttgatgtggtatcagcttccaccagaaactgaattgcctattgtgttccgcacatatcag
aggcttcttaatgaaggaaaagctccatctccagttccagtttatattgatgaaggacct
atagaagtgtcaatgaattggcatgcggtgaaacattctgacctcggttactatcttatg
cttcttcatgccaatcaagaaattgatttcagtgctctaaagacgatgttcagtgccttt
gcttcaacaaatgatccccttgactaccatatgatctggcatcagcgagctgttttagaa
gccattggtgctttcagttctaatgatcttcatgtgctagacattagtttcatttctcag
ctgctatgccttggtcaatgtcattgggctgtctatgtggtgcttcacatgcctcaccgt
gaagattgtccttatttgcaagctgctcttattagggaaatactcttccagtactgtgaa
acttggagttctcaggacttgcagcggcaatttattgaggatctaggtattccatcagca
tggttgaatgaggctttggcaacatattttaattattactctgaattctccaaagcccta
gaacactttttggagtgcggaaagtggcagaaagcgcacactatttttatgacttcagtt
gctcattctctttttctatcagaagaacactcagaaatatggaggctagcagcttccatg
gaggatcacaaatcagaaattgaagattgggatctgggagctggaatatatatatctttt
tatttgttgagaagttcttttcaggaggacagtgacactatgaatcaagacactatagaa
aacaaagacaatgcttgtgcagacttcattagtcgcttaaacaactctttggctgtttgg
acaaacagattgcctgtcaaagcgagggtggtttattcgaaaatggctgaggagatatgc
aatttgctgctttctgatagcagtggaagttcatcaaatgaggtccagctaagctgctac
gataccatattcaaggcacccatacctgaagacacccgtgcataccatttgcaggatgct
gtgtctctttttacatcttacctttctgaggtgccgtcatag
DBGET
integrated database retrieval system
