Solanum stenotomum: 125860074
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Entry
125860074 CDS
T08385
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125860074
Transcription machinery [BR:
sstn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
125860074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
125860074
NCBI-ProteinID:
XP_049395928
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Position
3:complement(18009678..18014188)
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AA seq
516 aa
AA seq
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MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLPIETS
KENEKRSRRVSKRSERVHAVAIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQDH
LVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKKSKRLNLDQRIALLKNKEGEMVASSER
RKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQV
KENLQNDLGREPTDGEVAEVTNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQD
FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG
LESIRVEIQKAKLELLFELQRIPTDEEIIKRVELSPERYHEVMKVSKPVSSLHARNKTTQ
EELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
AGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttcaagctctgcatctcgaagtccattgggattaagctcaagg
ttttcgactcgtttatgtccgcttaaaaggccagtaattgtatcgtttaaaaaggataaa
acgaagaatacaactttaattgcacctaaagaatccatatccttgcctattgaaacatct
aaagaaaatgaaaagaggtcaagacgagtgtctaagcgttccgagagagtgcatgctgtt
gcgatcgaagcctctccaagtacgttagaattagactacagtgaagctgctgccaaactt
gaaagtatctacaagcgcagtctggaaactgctagctccaatacagaagttcaggatcat
ttggtgaagagaaggccaaggacgaggaagaggattgtagaaggtgatgaggaagcgaag
aaagaagttgctgataatgtggtcaaaaatcgtagaaagaagtcaaagaggttgaatctt
gaccagaggattgccttactaaagaataaagaaggtgaaatggttgcttcatcggaaaga
agaaaacttaaagaggacactgaagatgaaaaaattgataagcttgtcagagaatattca
ggtgctactgacttagcgagcttagactggaagaaaatgaagatccctccagtgcttcca
tcatctgagcatgtgtggctcttcaagttgatgcaacctatgaaggcaatcctacaagtt
aaagaaaacttgcaaaacgatttggggcgagaaccaactgatggtgaagtggctgaggta
acaaatatggatgcctctgaactacggaaaaagctggaagttggtcgagctgctagaaat
aagctgattaagcacaatctacgacttgttttgtttgttatgaacaaatattttcaagat
tttgcaaatgggtcaagattccaagacctctgtcaggcaggcgtcaaaggtctaatcaca
gctattgaccgatttgaacctaatagaaaattcaggctatcaacctatggtcttttttgg
ataaggcatgccataatacgttctatgacaacctcaagcttcaccaaagttccattcggg
cttgaatctatcagagtggaaatccagaaggccaaattggagttgctgtttgagcttcag
aggataccaactgatgaagaaataattaaaagagttgaactttcccctgagagataccat
gaagtgatgaaagtatctaaacctgtctcctctctccatgcaagaaacaagacaacccaa
gaagaactcatcaatggaataactgacgtagatggtgttgatggggataagaggaagcag
ccagctctactcaggcttgctcttgatgatgtgcttgattctcttaagcccaaggagagt
ctagtaatcagacaaagatatggacttgatggcaaaggtgatagaacattgggagaaatt
gcgggtaacctaaatatttcgagagagatggtacggaagcatgaagttaaggctctcatg
aagctcaagcatccaactcgagtggattatgttcgccggtacatattctaa
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