Solanum stenotomum: 125860093
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Entry
125860093 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125860093
KO
K04485
DNA repair protein RadA/Sms
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125860093
DNA repair and recombination proteins [BR:
sstn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
125860093
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
ChlI
Zn_ribbon_LapB
AAA
AAA_16
AAA_22
NACHT
Lon_C
NTPase_1
AAA_24
nSTAND3
AAA_19
nSTAND_NTPase5
AAA_14
AAA_29
DAP3
Motif
Other DBs
NCBI-GeneID:
125860093
NCBI-ProteinID:
XP_049395944
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All DBs
Position
3:2010923..2021925
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AA seq
593 aa
AA seq
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MQVPNMQALRALRFQKHLLNLPPTNPLSSLRFTVICSSRQFHFTRRKHFPEESTALTEDA
VQGWAAPSAARENPSGENVPQRESKSSANYSNVLGSKGRVYEVTGNGNKKKGKGKSKTVW
VCSDCGYDDGQWWGICKQCNGVNTMKRFSEGVEHLTSGFEVLENVTRSWLPHQSVRAMPT
KLTDVNKGINQSNWRIPLSGLFGAEVGRVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAI
VAEGCEMGGPAAVLYVSGEESIEQIGNRADRMRIGTDELFLYASTDVEDILEKTQTLSLR
ALVIDSIQTVYLRGVTGSAGGLSQVKECTEVLLRFAKKTNIPVFLIGHVTKSGEIAGPRV
LEHIVDVVLYMEGEKCSSHRLLRSVKNRFGSTDELGVFEMSQSGLQAVSNPSEMFLSEQQ
SDSEFLAGLAVTVIMDGSRAFLIEIQALCVAGSSVSRQVNGVQAGRAEMIISVLIKQAGL
KLQENGVFLNVVSGVSLSETAGDLAVAAAICSSFLEFPLPVGIAFIGEIGLGGEIRTVPR
MDKRINTVVKLGYKKCIIPKSAETSLSALDLGDTEIVACRNLKEMINIVFRKR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaccaaacatgcaagcgctaagagctctccgtttccaaaaacacttgctcaat
ctccctccaacaaaccccctttcgtctctccgtttcactgtcatatgcagttctcgccag
ttccacttcactcgccggaaacacttccctgaagagtccacagctctcaccgaagacgcc
gtacaaggctgggccgctccttcagctgctcgagaaaaccctagtggtgagaatgttccg
caaagggagtctaaatcgagtgcaaattactccaatgttttgggttcaaagggcagggtt
tatgaggttacagggaatgggaacaagaagaaggggaaagggaagagtaaaacagtgtgg
gtgtgttctgattgtgggtatgatgatggacagtggtgggggatatgtaagcagtgtaat
ggggtgaatactatgaagcggttttctgaaggggtagagcatctcacgagtgggtttgag
gttttggagaatgtgacaaggtcgtggctgcctcatcagtctgttagagctatgcccacg
aaattgactgatgtgaataagggaattaatcaatcgaattggcgaatccctctgtctggc
ctttttggagctgaagtgggaagagtacttggtggtggtcttgtgccaggttgcttagtt
ttaattggaggtgatccgggtgttggtaagagcacattactgttacagattgcagccata
gttgcagaggggtgtgaaatggggggaccagcagcagttctctatgtgtctggggaagag
agtattgagcaaattgggaacagagctgatcggatgagaatcgggacagatgaactattt
ttatatgcaagtacagatgttgaggatattttggaaaagacccaaactctctcactgcga
gctttggtaattgattccatccagacagtatatctgagaggagtaactggaagtgcaggt
ggtctatcgcaggtaaaagaatgcacagaagtattgctgcggtttgccaagaagaccaat
atccctgtgtttctgattggacatgtgactaaatctggagaaatagctggtcctcgcgtc
ttggaacacatagttgatgttgttctctatatggaaggagagaagtgctcatctcatcgt
ttacttcgttcagtgaagaatcgatttggatccacagatgagcttggagtgtttgaaatg
tcacaatcaggcttgcaggctgtttcaaacccaagtgaaatgtttctaagtgaacagcag
tcggattctgagtttctggctggattagctgttactgtaattatggatggatctcgagcc
tttcttattgaaattcaggcattgtgtgttgctggttcatctgtctcaagacaagtaaat
ggtgttcaagctggcagagctgagatgataatttcagttcttataaagcaagctggtctc
aagctgcaagagaatggagtttttctcaatgttgtcagtggtgttagcctgtcagagact
gctggtgatcttgcagtagcagcagcaatttgcagcagttttttggaattccctcttcct
gtgggcattgcattcattggggaaattggccttggtggtgaaattcgtacggtaccaaga
atggacaaaaggataaatacagtggtgaagctgggatacaagaaatgtataattcccaaa
tcagctgaaacatcactgtcagctttagatcttggagatactgagattgtggcctgcaga
aatttgaaagagatgataaacattgtgttcagaaaacgctga
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