Solanum stenotomum: 125860146
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Entry
125860146 CDS
T08385
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00531
Glycosaminoglycan degradation
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
125860146
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sstn00536
]
125860146
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
125860146
Glycosaminoglycan binding proteins [BR:
sstn00536
]
Heparan sulfate / Heparin
Enzymes
125860146
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
DUF8196
UPF0259
Motif
Other DBs
NCBI-GeneID:
125860146
NCBI-ProteinID:
XP_049396003
LinkDB
All DBs
Position
3:7177418..7182683
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AA seq
541 aa
AA seq
DB search
MDFRTLLLIFLALCPALSAQTVKEIVLMIDASTKVAWTDANYICATIDWWPKEKCNYNQC
PWGSASIINLDLTHPYLENAIRAFKGLRLRLGGSLQDQVIYGVGNLKSPCSSFTQQKDGL
FGFSKGCLPMQRWDELNNLFKKTGALVTFGLNALYGRQPTNRHAWVGNWDSSNALDFIKY
TVAKGYQINSWEFGNELSGSGIGASVDAAQYGKDVIQLHNLLNQVYQNTPVRPLLLAPGG
FYDPGWFGKLLQVSGRGTVNVLTHHIYNLGPGSDNKLVDKILNPEYLSRIEGTFSSLTQT
ILRNGPWASAWVGESGGAFNSGGPDVSNAFVDSFWYLDQLGMAAKHHTKVYCRQTLIGGN
YGLLDTDTFVPNPDYYSALLWNRLMGKVVLHVVNSAAPHLRTYAHCTKDRAGVTLLLINL
STQIQYKVNIHSTAETSLQVGEKKVHNKKSFARSIKESVSWVGTKSSDVTLSREEYHLTP
EGGNIKSRTMLLNGKLLRLTETGDIPSLSPALANLNSPISIEPLSIKFIVFPNFNSPSCS
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagaaccttgttgttaatctttttggcactatgccctgcactttcagcacaa
acagttaaagaaatagtacttatgattgatgcatctacgaaagttgcctggacagatgct
aattacatttgtgctaccattgattggtggcctaaggagaagtgtaactacaatcaatgt
ccttggggttcagcatctattataaacctggatttaactcatccatatctggagaatgct
atacgagctttcaagggtttgagattacggcttggaggttctttacaagaccaagtaata
tatggcgtagggaacttgaaatctccttgcagttcattcacccagcagaaggatgggttg
tttggattctctaagggatgcttacctatgcagagatgggatgagctaaataaccttttc
aagaagacaggagcacttgtgacttttggcttgaatgcactgtacgggagacaaccgaca
aataggcatgcgtgggtaggaaattgggattccagcaatgcccttgatttcataaaatac
actgttgccaagggctaccagataaactcatgggaatttggaaatgaattgagtggtagc
gggattggtgcaagtgttgatgctgcacagtatggaaaagatgttatccagctgcacaat
ctcttaaaccaagtatatcagaacacccccgtacgtcctctactattagcaccaggagga
ttctatgatcctgggtggttcggcaagctccttcaggtttcagggcgtggcactgtcaat
gtcttgacacatcatatttataatcttggtccggggtccgataacaagctagtggataaa
attttaaatcctgaatacctgagtagaatagaaggcacattcagcagtcttactcaaacc
attctaagaaatggtccttgggcttcagcttgggttggagaatctggtggagccttcaac
agtggaggtcctgatgtgtctaacgcctttgtagatagcttttggtacttagatcagctt
gggatggcagccaagcaccatactaaagtatactgcagacagacgcttataggtggaaat
tatgggctccttgataccgatacgtttgttccaaatcctgattattatagtgcacttctt
tggaatagactgatgggaaaagtagttcttcatgttgtcaacagcgcagcaccacatttg
cgcacttatgcccattgtacaaaagatagagcaggtgtgactttacttctgataaattta
agcacccagattcagtacaaggtcaacatccactctactgcagaaaccagcttgcaagtt
ggtgagaaaaaggttcacaacaagaaatcattcgcgcgcagtattaaagaaagtgtctca
tgggtaggaaccaagtcatcagatgttacattatcgcgagaagagtaccatctaacacca
gaaggtggcaacattaaaagcagaacaatgctcctcaacgggaaattattgcgactcaca
gaaacaggagacattccaagcttgtctccagcccttgcaaatcttaactctccaatatct
attgaaccattgtccatcaagttcattgttttccccaattttaattctcccagttgtagt
agatag
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