Solanum stenotomum: 125860323
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Entry
125860323 CDS
T08385
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125860323
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstn02000
]
125860323
04147 Exosome [BR:
sstn04147
]
125860323
04090 CD molecules [BR:
sstn04090
]
125860323
Enzymes [BR:
sstn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125860323
Transporters [BR:
sstn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125860323
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125860323
CD molecules [BR:
sstn04090
]
Proteins
125860323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
RsgA_GTPase
ABC_ATPase
AAA_30
PRK
AAA_15
Zeta_toxin
AAA_24
DUF87
DUF815
Motif
Other DBs
NCBI-GeneID:
125860323
NCBI-ProteinID:
XP_049396209
LinkDB
All DBs
Position
3:complement(22793546..22800244)
Genome browser
AA seq
1227 aa
AA seq
DB search
MSSSSEKAFENKNKNSIGIIFRYADGKDILLMFLGTIGAIGDGISTNCLLVYVSQLFNSL
GYGKTQQNNHNFMEQIEKCSLYFVLLGLGVMVVAFMEGYCWSKTSERQVLKIRYKYLEAI
LRQEVGFFDSQEATTSEITNGISKDTSLIQEVLSEKVPLFVMHTTVFISGIVFSAYFSWR
LAIVALPTIFLLIIPGLIYGKYLLYLSGKSFKEYSKANGIVEQALSSIKTIYSFTAEKSV
IERYSLILDGTIKLGMKQGIAKGLAVGSTGLSFAIWALLAWYGSHLIMHNGENGGRIYAA
GVSFVLGGLSLGMALPEVKYFTEASVAASRIFDRIDRVPEIDGEDTRGLVLEDIRGEVEF
RNVKFTYPSRPDTVVLKDFNLKIEAGKTVALVGSSGSGKSTVIALIQRFYDANAGAICID
RVEIKSLQLKWLRGKMGLVSQENALFGTSIRENIMFGKVDATMDEVVAAAMTANAHNFIT
QLPDGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALD
QAIVGRTTLVVAHKLSTVRNADLIAVVSNGCISELGAHNELMEKDGQYARLAKLQRQFSS
IDQEQSAEPRISSVARSSAGMRASPAVTASPLLIEDSPIQASPHPPPSFTRLLSLNLPEW
KQGIIGILAAIAFGSVQPVYALTIGGMISAFYSPSHEEMQSRIQKYCMIFIILCLVSVIL
NLCQHYNFAYMGERLTRRIRLQVLEKILSFEAAWFDEEQNSSGALCCRLSNEAAMVKSLV
ADRVSLLVQSTSAVTVAMVMGLIVAWKLALVMIVVQPLTILCFYTRKVLLSTMTAKFVKA
QCRSTQIAVEAVYNHRIVTSFGSIYKVLDIFDEAQDEPRKEARKKSWLAGIGIGSAQGLT
FICWALDFWYGGKLVNAGEISAADVFKTFFILVSTGKVIAEAGSMTSDLAKGSTVVASIF
SILDRKSLIEGSHEAKNNSIGTKMTGRIEMKKVDFTYPSRPDRLVLHEFSLEVKAGTSIG
LVGKSGCGKSTVIALIQRFYDADKGSLKIDGMDIRLLDLGWYRGNMALVSQEPVIYSGTI
RENILFGKLNASENEVVEAAKAANAHEFISSLKNGYETECGDRGVTISGGQKQRIAIARA
IIRNPSILLLDEATSALDVQSEQLVQEALDQLMVGRTTVVVAHRLNTIRNLDSIAFISEG
KILEKGTYSYLKDKRGAFFNLVNLQST
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcatccgaaaaggcgttcgaaaataaaaataaaaattcaataggtattatt
tttcgatatgctgatggaaaagacattttattaatgtttttgggtacaattggagccatt
ggagatggtatatcaacaaattgtttgttggtatatgttagccaactttttaatagcttg
ggttatggtaaaactcaacaaaataatcacaatttcatggaacaaattgaaaagtgtagt
ttgtattttgtactcttgggattgggagtcatggttgtggcctttatggaaggttactgt
tggagcaaaacaagtgagaggcaagtgttaaaaataaggtacaagtatttggaagctatt
cttaggcaagaagttggtttctttgattcacaagaagctaccacttctgaaattactaat
ggtatttctaaagatacttctctcatacaagaagttcttagtgaaaaggtacctctattt
gttatgcacacaacagttttcatctcaggaattgtattttcagcctacttctcatggaga
ttggctatagttgccttaccaacaatatttctcctcataatccctggtttaatctatggt
aaatatctactctatttatctggaaaatccttcaaagaatatagcaaagcaaatggtatt
gtagagcaagcacttagctctattaaaacaatatattcatttactgctgagaagagtgtg
attgaaagatactcattgattcttgatggaacaataaagttgggaatgaaacaaggaatt
gcaaaaggtcttgctgttggtagcacagggttgtcttttgctatatgggctttacttgct
tggtatggaagtcatttgattatgcataatggagaaaatggtggtagaatttatgcagct
ggagtttcatttgtcttgggtggattatcacttgggatggctctgcctgaggtgaaatac
ttcactgaagcttctgttgctgcctcgagaatatttgataggattgatcgcgtaccagaa
attgatggtgaagacacaaggggactcgtgctcgaagatattagaggagaggttgaattc
aggaatgtcaagtttacatatccttctcgcccagataccgttgtcctcaaggacttcaat
cttaaaattgaagcaggcaaaacagtagcccttgttggatcaagtggaagtggaaaatcc
actgtcattgccctgattcaacggttttatgatgctaatgcaggagctatatgtattgat
agagtagaaataaagtcgttgcagttgaaatggttgagagggaaaatggggttagtaagt
caagaaaatgcattatttgggacatctattagggagaatataatgtttgggaaagttgat
gcaactatggatgaagttgtggctgcagcaatgaccgcgaatgctcataatttcatcacg
caacttccagatggatatgagaccaagattggtgaaagaggagcacttctatcaggtggt
caaaagcagagaattgcgattgctcgagccattataaagaatcctgtgattcttctgctt
gatgaagccacaagtgcacttgattctgaatcagaaacacttgttcaaaatgccttggat
caagctatcgttgggagaactacactggttgttgcccataagctatcaacagtaagaaat
gcagacctcattgcagtagtgagtaacggttgcatcagtgaactaggggcacacaatgag
cttatggagaaagatgggcagtatgcaagactagcaaaacttcaaagacagttcagctct
atcgatcaagaacaaagcgctgaacctcgtatttcttcagtagcaaggagcagtgcagga
atgagagcaagtccggctgtaactgcctcacccttgctcattgaggatagccccatacaa
gcttcacctcatcctcccccttccttcactcggctcctttcgttaaacttacctgaatgg
aagcaaggaattattggaatcttagcagccattgcatttggttcagtgcaacctgtctat
gcactaaccataggtggcatgatttctgctttttactcgccaagtcacgaggaaatgcaa
tctagaattcagaaatactgtatgattttcatcatcctttgccttgtctcagttattctc
aatctttgccaacattacaatttcgcttacatgggagaacgcctgaccagaagaataaga
ctgcaagtgctcgagaagattttgagcttcgaagcagcctggtttgatgaggaacagaac
tcaagtggagctttatgttgtcgattgagcaatgaagcagccatggtgaaatctcttgtt
gctgatagagtttcactcttagtccaaagcacttcagcggtcactgttgctatggtaatg
gggctaattgtggcttggaaacttgcactagttatgatcgttgttcaaccactcacgatt
ctctgcttttacacacgaaaagtcttactatccactatgacagctaaatttgttaaggca
caatgtcgtagcactcaaattgctgtagaggctgtttacaatcataggatcgtgacgtca
tttgggagcatatataaggttcttgacatctttgatgaggcacaggatgagccaaggaaa
gaggctaggaagaaatcttggttagctggtatcggtataggatcagcacaaggcctaaca
ttcatttgttgggccctggatttttggtatggcggaaagttagttaatgctggagaaata
tcagctgctgatgtcttcaagactttctttatattagtcagtactggaaaggtaatagct
gaagctggaagcatgacttctgatcttgccaagggatcaacagtagttgcttcgattttt
tccattcttgatcgaaaatcactgatcgaaggatcgcatgaggcaaagaataacagcata
ggtaccaaaatgaccggtcgaatagagatgaaaaaggttgattttacatatccaagtcgg
cctgacaggctagtgttgcacgaattcagcctggaggtgaaagcaggcactagcattgga
ctggttgggaaaagtggatgcggaaaatcaacagtaattgcgttgattcaaagattttac
gatgcagataaaggatcactgaaaatcgatgggatggacattcgattactcgatttagga
tggtatagagggaacatggcccttgtaagtcaagaaccagtgatatattcaggcactatc
cgtgaaaacattttgtttggcaaacttaatgcatctgaaaatgaggtagtggaagctgca
aaagctgctaatgcacatgaattcatttcgtcacttaaaaatggatacgagacggaatgt
ggtgatagaggtgtgacaatttcaggagggcaaaagcaaagaattgctatagcacgggca
ataatacgtaacccaagtatactacttctagacgaagcaacgagtgctctggatgttcag
tcagagcaacttgtgcaggaagcattggatcaactaatggttggaagaacgacagtggtt
gtggcgcatcgccttaatactatcaggaatttagactccattgcttttatttcagagggg
aagattttggagaaaggaacctattcttaccttaaggataaacgaggcgcatttttcaat
cttgtcaatcttcaatccacataa
DBGET
integrated database retrieval system
