Solanum stenotomum: 125860410
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Entry
125860410 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125860410
KO
K17925
sorting nexin-13
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sstn04990
]
125860410
Domain-containing proteins not elsewhere classified [BR:
sstn04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125860410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
NSP2-B_epitope
DHHW
Motif
Other DBs
NCBI-GeneID:
125860410
NCBI-ProteinID:
XP_049396322
LinkDB
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Position
3:complement(2320228..2331111)
Genome browser
AA seq
1133 aa
AA seq
DB search
MSTTQGQAVTVRDLIEEAKKRIVILLLCVIGLSYIMSLTSSSVFINLPAAALLIVVLRYL
SLDFDARIKAATYKSKSSSLNSTIQKKQLDGPRTVNEKSDWRKKVDSPVVEDAIDHFTRH
IVSEWVTDLWYCRITSDRQGPEELVQIMNGVLGEISCRMRSINLIDLLTRDIVSLICTHL
ELFRTCKLRIEKKNSRSLTIEERDLELKLTLAADDKLHPALFSPEAEHKVLQHLMDGLIS
FTFRPEDLQCSLFRYIVRELLACVVIRPVLNLVNPRFINERLESLAISLKKADKGPTAAQ
TEQESSPSVSEKVSADHFSGVLDSSAKGLELVQFRRDQTNDTMENNTMNNGNGSDLSKDP
LLSIDTRSTRSWSSLPSQTNTDDGRGLQKHRSGGEWGEMLDLVSRRKTETLAPENLDNMW
TKGRNYKRKEEGNLASDSLQQNSLLGAPKSQEHLKGMLRPKESERENKVNVNHYLNANTQ
PFQYQEEDEHNSDEVESESTSSYTTDDEEPISVTGLDSPGNKVWDAKNRRNTNHIHHPLE
SNAGHKTRKGKASKGHIRSKHLNKVPSARKKSRASSQTEHVWQEIQRSSFLLGDGHDILN
SKDNEKPDVLSDHSDSEMPGRISSGTNASSSSLSSSVLTNQKMDANSVKSSIIADSFLKL
TCEVLNANIVKSGSKTFAVYSLSVTDVNNHSWSIKRRFRHFEELHRRLKEYPEYNLHLPP
KHFLSTGLDVQVIRERCKFLKEYMKKLLQLPSVSNSIEVWDFLSVDSQTYSFSNSLSIID
TLPVNLDDTVHKVNKEPLPKIGPRTDIIFSTAEHDAERKERVLMHHPVVDESRYGKKYVT
LSPPKRPTKGAFEDSSSGSDNVQTNKVPIPATGTTLKSVETNSHASHRSSDSFVDAPVDS
SLPVEWVPPQVSAPVLDLVDVIFQLQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIGKIQ
RLRRGSAVAAGIRRIEQILWPDGIFITKHPSRQRPTPSASQSVGGSPSNQPPTPSASPIV
GSPQNRPTPSSSPTVEDIQKLDEMQQKEAEQRANLVYELMIEKAPAAIVGLVGHKEYEQC
AKDLYYFIQSSVCLKLLVLDLVELLLLSAFPELDGVFNTLHQEKRKFGELKID
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacccaagggcaggccgtgacggttcgggacctcattgaagaagctaaaaag
cggattgtaatcttgctcctatgtgttattggactttcgtatatcatgtctctaacgagc
tcttcagtttttatcaacttgcctgctgctgctctcctaattgttgtgcttcgctatcta
tctctggactttgatgcacgaataaaagctgctacatataaaagcaagtcatcctcatta
aatagtactattcagaagaaacagttagatggtccaagaacagttaatgagaagtctgat
tggaggaaaaaagtagattcacctgttgtggaagatgcaattgaccacttcaccagacac
atagtctctgagtgggtgacagatctctggtactgccgtattacttctgatagacagggt
ccagaggaacttgtgcagatcatgaatggtgtgctaggggaaatttcatgtcggatgaga
tccatcaatcttatagatcttttaacaagggatattgtcagtctaatatgcactcatttg
gaactgttccgtacatgcaaattgaggattgagaaaaagaattcaagatccttgactata
gaagagcgagatctggaacttaaactgacgctggctgcagatgacaagttacatccggct
ttgttttctccagaagctgaacacaaggttctccagcatcttatggatggtctcatttcg
ttcacgttcagaccagaggacttgcagtgctctttatttcgatacattgtgagggagctt
cttgcttgcgttgtgatacgaccagtactgaatttagttaaccctaggttcattaacgag
aggcttgaatctctagctatttccttaaagaaggctgataaaggacctactgcagctcaa
acagaacaggaatcaagtccaagtgtatctgaaaaggtatcagcagatcatttttctggg
gtgttggattcttctgcgaagggtctcgaacttgttcagtttagaagggaccaaactaat
gatactatggagaataatacgatgaacaatgggaatggatcagatttgtcaaaggatcct
ttgctttcgattgatacacggtctactcgttcttggagttctttgccgtcacaaaccaac
acagatgatgggagaggtctccagaaacaccgctctggaggagagtggggtgaaatgcta
gatttggtgtcacgtcgaaagactgaaaccctggctccagagaacttagacaacatgtgg
acaaaaggaagaaactataaaaggaaagaagagggcaatctagcatcagattcactccaa
cagaattctttgctaggggcacctaaatcacaggagcacttgaagggaatgctaagaccg
aaagagagtgagagggaaaataaggttaacgtgaaccattatttgaatgctaatacccaa
ccttttcaatatcaagaggaagatgagcacaactcagatgaggtcgaatcagagagcact
agttcttacactactgatgatgaggaacctattagtgtgacaggtcttgattctcctggt
aataaagtgtgggatgcaaaaaatagaaggaataccaatcacattcatcatccacttgaa
agtaatgctggtcataagacaagaaagggaaaagctagcaaaggtcatattcgctctaag
cacttaaataaagtaccatctgcgaggaaaaaatccagagcaagtagccaaacagagcat
gtatggcaagagattcaaagatcgagcttcttattaggggatggacatgatatattaaac
tctaaagataatgagaaaccagatgttctgagcgatcactctgattcagaaatgcctggt
agaatttcaagtggcaccaatgcatcatcatcttctttgtcaagcagcgttctcactaat
cagaaaatggatgctaattctgttaaaagttctataattgctgattcctttttgaagtta
acatgtgaggtcttgaatgccaatattgtaaagagtggctcaaaaacttttgccgtttat
tccttatctgttacagacgtgaacaatcatagctggtccatcaaaagaaggtttcgtcat
tttgaggagctacacagacgtcttaaggagtatcctgagtacaatcttcatttgccaccc
aaacattttctctctacaggtctggatgttcaagtcattcgagaacgatgcaaatttctt
aaagaatatatgaagaaactgctgcagctcccaagtgtttccaactccattgaggtttgg
gacttcctcagtgttgattcgcagacatatagcttttcgaattccctttccataatcgat
acattaccagttaacctggatgatacagtacacaaagtaaataaagaacctctgcccaag
attggcccaagaactgatatcatattctccacggcagagcatgatgctgaaaggaaggag
cgagtcttgatgcatcatcctgtggtggatgaatcaagatatggcaaaaaatatgtcaca
ctgtcccctccaaaaagacccaccaaaggagcttttgaggattcaagtagtggttccgac
aatgtacaaacaaataaagttccaatcccagccacaggaacgacgctaaaatcagttgaa
actaattcacatgcctcacatagatcatccgattcctttgttgatgctcctgttgattcc
tcccttcccgtagagtgggtgcctccacaggtaagtgcaccagttctagacctggttgac
gtcatttttcagctccaagatggtggatggatcaggagaaaggcattctgggtggcgaaa
caggttttacaattgggaatgggtgatgcatttgatgactggctgattgggaaaatccag
cgtctgcgcaggggttcagcagttgctgcaggcattagacgtattgagcagattctatgg
cctgatggaatattcataacaaagcatccaagtcgacaacgtcctacaccatctgccagt
caatctgttggtggttctccatcaaaccaacctcctactccatctgccagtccaatcgtt
ggttctccacaaaaccgacctactccatcatcatcaccaacggtagaggatatccagaaa
ctggatgagatgcaacagaaggaagctgaacagcgtgctaaccttgtatatgagctgatg
attgaaaaagcgcctgctgctattgtcggactagttggtcacaaggaatatgaacaatgt
gcaaaggatctttattacttcatccagtcatctgtgtgtctaaagctgttagtccttgat
cttgttgagctgctactgctgtctgctttcccagagctggatggcgtattcaacacattg
catcaagagaagaggaagtttggagagctcaaaatagattag
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integrated database retrieval system
