KEGG   Solanum stenotomum: 125860473
Entry
125860473         CDS       T08385                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
sstn  Solanum stenotomum
Pathway
sstn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125860473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sstn03019]
    125860473
Messenger RNA biogenesis [BR:sstn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125860473
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     125860473
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 125860473
NCBI-ProteinID: XP_049396394
LinkDB
Position
3:1064343..1069541
AA seq 128 aa
MSWASPEDIYTSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDL
YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaagtccagaagatatctatacctccacttctcttgcaagttatcttgac
aagaaacttcttgtgctgttgcgagatgggcgaaagcttttaggaatacttcgttctttt
gaccaatttgctaatgctgttcttgaaagtgcatgtgagcgtgctattgttggtgatcta
tattgtgatatcccattaggtctttatattatacgtggggaaaatgttgtgttaattggt
gaactggacgtggataaggaggaacttcctccccatatgacacgtgtttcagaagctgag
ataagaagggcacagaaagcagaaagggactctacagatcttaaaggctcaatgaggaag
aggatggaatttcttgatatggattga

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