Solanum stenotomum: 125860585
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Entry
125860585 CDS
T08385
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125860585
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125860585
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125860585
NCBI-ProteinID:
XP_049396542
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Position
3:complement(45428818..45430736)
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AA seq
447 aa
AA seq
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MGGPKIKYTFLFLCITFATIIPSLMAHIGHYDEVWRRRAEEAKEYARQIYEPHPENVTLA
FNQKLRNTMKELKKVKGTNSTRRGLGTKKYHGPCMVTNPIDRCWRCDPNWANNRKRLADC
AMGFGSKVTGGKNGEFYVVTDNSDDYNDPKPGTLRYAVIQKEPLWIIFKRGMNIRLHQEM
IMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHDIVEGNGGMVRDAVDHIGIRT
KSDGDGISIFGASNIWIDHVSMQRCYDGLIDAVEGSTGITISNGHFTDHNEVMLFGASDS
SSIDQVMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIITQGN
RFIAPPDIFKKQVTKREYNPESVWMQWTWRSEGNLFMNGAYFTESGDPDWSKKHKDFYDG
ISAAPAEDVTWMTRFAGVLACKPGKPC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtcctaagataaagtatacctttctatttctatgtatcacttttgctactata
ataccaagccttatggctcatattggtcactacgacgaggtgtggaggaggagagcagaa
gaagcaaaggagtatgcccgtcaaatttacgagccacatcctgaaaatgtcacacttgca
tttaaccaaaaacttcgcaacacgatgaaggaattaaagaaagtgaaaggtaccaatagc
acaaggagggggctagggacaaaaaagtaccatggaccttgcatggtcacaaatccaatt
gataggtgttggagatgtgaccctaattgggcaaacaataggaaaagattagcagattgt
gcaatgggatttggatctaaggtcactggtggcaaaaatggtgaattctatgtcgtcaca
gataattctgatgattataatgatccaaaacccggaactcttcgttacgctgttatccaa
aaggagccattgtggatcatatttaaaaggggtatgaacattaggttgcaccaggaaatg
atcatgcagagtgacaagacgatagatgctcgtggtgttaatgttcacattactaaaggc
gctggtataaccctccagtacatcaagaatgtgatcatccacggacttcacattcatgac
attgttgagggaaatggtggaatggttcgggatgctgttgaccatattgggatacgtaca
aagagtgatggagatggtatttcaatcttcggtgcatccaatatatggattgatcatgtg
tccatgcaacgttgttatgatggtttgatcgatgctgtagaaggatcaacaggtatcact
atatcaaatggacatttcaccgatcacaatgaggttatgttgtttggtgcaagtgatagt
tcttcgattgatcaagttatgcaaatcacattagctttcaatcattttgggaagagattg
gtacaaagaatgccaagatgtcgatggggatatatacatgttgttaataatgactatact
cattggaatatgtatgccattggtggtagcatgcatcccactatcattacacagggtaat
cgttttatcgcgcctccagacatcttcaagaagcaggtaacaaagagggagtataatcca
gaatcagtgtggatgcaatggacatggagatcagagggaaatctattcatgaatggtgca
tacttcactgaatcaggagatccagattggtccaagaaacacaaagatttctatgatgga
atatcagctgcccccgcagaagatgtcacttggatgactagatttgcaggtgtacttgcc
tgcaaaccaggaaaaccttgttag
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