Solanum stenotomum: 125860588
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Entry
125860588 CDS
T08385
Name
(RefSeq) probable pectate lyase P56
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125860588
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125860588
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Herpes_BMRF2
Motif
Other DBs
NCBI-GeneID:
125860588
NCBI-ProteinID:
XP_049396545
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Position
3:complement(45368530..45370194)
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AA seq
398 aa
AA seq
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MEYSYRTKINVLFIVLILFVFAALGTATNAPRRKLTKKYKGPCMAVNSIDKCWRCDPFWA
EDRQKMADCALGFGINAMGGKYGPYYIVTDNSDDDVIDPKPGTLRFGVIQKGPLWITFAK
SMRIELSRELIVSSNKTIDGRGKYVHIANGAGIKIQSASNVIISNLRIHHIVPTAGGLLR
ESDDHLGLRGGDEGDAISIFNSHDIWIDHISMSRAADGLIDAVAGSTNITISNCHFTDHE
KVMLFGANDHSVEDRGMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGS
SGATIISQGNRFIAEDKLLVKEVTYREKSTSSVEEWMKWTWISDGDDLENGATFTPSGDQ
NLLSKIDHLNLIQPEPSSKVGLLTKFSGALSCNIRRPC
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagtactcttatagaacaaaaatcaatgtactattcattgtactcattctctttgta
tttgctgcactagggacagcaacaaacgctccgaggaggaaactaacaaagaaatacaaa
ggcccatgtatggccgtgaattcaattgacaagtgctggagatgtgaccctttctgggcg
gaagatcgccagaaaatggctgattgtgcgttgggctttggtatcaatgcgatgggagga
aagtatggtccatactacattgtcacagataattctgatgatgatgttattgatcctaag
cctggaactctgcgatttggggtgatccaaaagggaccgttgtggatcacatttgccaaa
agtatgagaattgaattgagcagggaactaattgttagtagcaataaaacaatcgatgga
cgtggaaaatacgttcacatagcaaatggagctggaattaagatacaaagtgcatcaaat
gttattatctctaaccttcgaattcaccatattgtacctaccgcaggtggcctgcttagg
gagtctgacgaccaccttggcctaaggggcggagatgaaggtgatgccattagtatcttc
aattctcatgatatatggattgaccacatctctatgtctcgtgccgctgatggtcttatc
gatgctgttgctggttccactaatattacgatatccaactgtcacttcactgatcatgaa
aaagtaatgttgtttggtgctaacgatcattcggtagaggacaggggaatgaaaataaca
ttggcgtataaccactttggaaagaggttggatcaaaggatgcctagatgcaggtttgga
tttttccatctggtgaacaatgattacactcattgggaaagatacgctattggaggaagc
agtggagcaacgatcatcagccaagggaataggtttattgcggaggataaattgttggtg
aaagaggtgacatatagagagaaaagtacatcaagtgtggaagaatggatgaaatggaca
tggatatcagatggtgatgatttggaaaatggtgctacatttacaccatctggtgaccag
aatttactctctaaaattgatcatctcaatttgattcaaccagaaccctcttctaaagtt
ggattactaactaagttttctggtgctttgtcttgcaacattcgacgcccatgttaa
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