Solanum stenotomum: 125860619
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Entry
125860619 CDS
T08385
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125860619
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125860619
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_4
Porin_3
CpXC
zf-MYST
zf-met
DUF3386
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
125860619
NCBI-ProteinID:
XP_049396573
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All DBs
Position
3:13943361..13976018
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AA seq
433 aa
AA seq
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MLSNNNPSSSSDPFNSSENANNASRRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICN
QGFQRDQNLQMHRRRHKVPWKLLKRETPIVRKRVFVCPEPTCLHHDPCHALGDLVGIKKH
FRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACS
MGRLRSESQSLHPPCLSRTASSTPSPSSDTNLSTTPWSSTLLKKLSSAAAAATHNANPNI
IKSCTNKHNLELQLLTTTTSSSSPAFDVSVSSKPNEDHSAYNLQLSIGSSDFNESSENAN
EKRSSDALRLKDEATEQLRIAMSEKVYAEEARQQAKRQIELAEQEFANAKRIRQQAQAEL
DKANALKEHAIKQINSTLSQITCHSCKQKFQSTTRVSIVDENNSLALSYISSGLSEGHHH
EVANNEHLKLSQR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgttaagcaataacaatccctcttcttcatccgacccgtttaattcctcagaaaatgca
aacaatgctagtagacgaaaacgaagacctgcaggaactccagatccagatgcagaagta
gtatcgctttcaccgaaaacgttactggaatcagatcgatacgtatgtgagatctgtaat
cagggatttcagagagaccaaaacttacagatgcatagaagaaggcataaagttccatgg
aagctgcttaaaagagaaaccccaattgttagaaagcgcgttttcgtttgcccagaacca
acttgtctccaccatgatccttgtcatgccttaggagatctcgtcggtattaaaaagcat
ttccgtagaaaacacagtaatcacaagcaatgggtttgtgagaaatgctcaaaaggatat
gcggttcagtctgattacaaagctcatcttaaaacttgcggcactcgtggccattcttgt
gattgtggccgcgttttttcaagggtggaaagcttcattgagcatcaagacgcttgtagc
atgggcagactccgatctgaatcacaatccttacatccaccttgcctttctcgcacagct
tctagtactcctagcccgtctagcgacacgaatctcagcacaacaccatggtctagtaca
ttgctaaaaaaactgtcatccgctgcagctgcagctactcataatgctaatcccaacatc
ataaaaagttgtacaaacaaacacaatttggagctacagctcttgactactactacatca
tcatctagcccggcatttgacgtctccgtatcatctaaaccaaacgaagatcattcagct
tacaatctccaactctccattggctcttcagacttcaacgagtcgtcagaaaacgcgaat
gagaagcgtagttcagatgctttgagactgaaagatgaggcaacggagcagctaaggata
gcgatgtcagaaaaggtgtacgcggaagaggcgaggcagcaagcgaagcgacagatcgag
ttggctgagcaggaatttgcaaatgctaagagaattagacaacaagcacaagcggagttg
gataaggctaatgctttgaaagaacatgccatcaagcaaatcaactctacactttcacaa
atcacttgtcattcctgcaaacagaaattccaatcaactaccagagttagtattgttgat
gaaaataactcattggcattgagttatatttcttcgggtttatcagaaggtcatcatcat
gaagttgccaacaatgaacatctcaaactttctcaacgttag
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