Solanum stenotomum: 125860666
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Entry
125860666 CDS
T08385
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125860666
03036 Chromosome and associated proteins [BR:
sstn03036
]
125860666
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125860666
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125860666
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125860666
microRNA pathway
RISC loading complex
125860666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Clr5
Motif
Other DBs
NCBI-GeneID:
125860666
NCBI-ProteinID:
XP_049396624
LinkDB
All DBs
Position
3:complement(13710710..13718086)
Genome browser
AA seq
1127 aa
AA seq
DB search
MVRKRRTELPGSGESSGSQETVGGQGRGQYRPQQQQQEGGYQGGGQGRGMRPPPQQQQQL
GGYQGGGQGRGQRPPQQHQQEGGYQGGGQGRGQRPPQQLQQEGGGRGWRPQQGGYGGRGS
GGAPPRGMAPQQSYGGQPEYYQQGRGTQQHQQRGGGPPQQHGGIGGRGAPSGGPSRPPIP
ELHQATTQTQHQAVMTTQPIPYGRPADTSMEVGSSSEPPEMSTLQVTQQFQQLAVQPEAA
ATQTIPPVSSKSLRFPLRPGKGKFGQSCIVKANHFFAELPDKDLHQYDVTITPEVSSRGV
NRAVMAQLVLLYQESHLGKRLPAYDGRKSLYTAGPLPFVQKEFKITLTDDDDGPGGARRE
REFKVVIKFASRADLHHLGMFLEGRQADAPQEALQVLDIVLRELPTSKYCPVGRSFYSPN
LGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTSFIEPLPVIDFVTQLLNRDVSSR
PLSDADRVKIKKALRGVKVEVTHRGNMRRKYRIANLTSQATRELTFPVDEKGTLKSVIEY
FRETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQR
PQDRERDILETVKHNAYAEDKYAKEFGIKISDKLAQVEARILPPPWLKYHDNGREKDCLP
QVGQWNMMNKKMVNGGTVANWICINFSRNVQDSVAHGFCSELAQMCGISGMNFNPNPVLP
PTSARPDQVERVLKTRFHDAMTKLQPLSKELDLLVVILPDNNGSLYGDLKRICETELGVV
SQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTH
PHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLYTTRQDPVKGTVSGGMI
KDLLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVV
VQKRHHTRLFANNHRDRNAVDRSGNIIPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAH
YHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDG
GSVTSGAAGRGVGAGAAGRNTRAPGAGAAVRPLPALKDNVKRVMFYC
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaggagaactgagttacctggttcaggtgagagctctgggtctcaagaa
actgttgggggacagggtcgtggccagtatcgaccccagcagcaacaacaagaaggtgga
taccaaggtggaggacagggtcgtggcatgcgtccaccaccccagcagcaacaacagcta
ggtggctaccaaggtggagggcagggtcgtggccagcgtccaccccagcagcatcaacaa
gaaggtggctaccaaggtggtggacagggtcgtggccagcgtccaccccagcagctacaa
caagaaggtggaggaagaggttggaggccacaacagggaggatatggtggccgtggtagt
ggaggagctccaccacgtggaatggcccctcagcagtcatatggtggacagcctgaatac
tatcagcaaggcagagggactcagcagcatcaacaacgaggtggaggaccaccccagcaa
catggtggcataggtggccgtggagcaccttctggtgggccttctaggccaccaattccc
gagctgcaccaagcaaccacacagactcaacatcaagctgtaatgactactcagcccata
ccttatggaagaccagctgacacatccatggaagtgggttcctcatctgagccccctgag
atgtcaactcttcaagtgacacaacagttccagcaactggctgtgcagccagaagcagct
gcaacccaaacaattccacctgtgtctagcaaatcactaaggtttccgctgcgtccaggg
aagggaaagtttggtcagagttgcatagtgaaagccaatcacttctttgcggagctacct
gacaaagacttgcaccagtatgatgtcaccattactcctgaagtatcttcacgcggtgtc
aaccgtgctgtcatggcacagctggtgcttctttaccaagaatctcatcttggaaagaga
cttccagcttatgatggaaggaaaagtctatacactgcagggccccttccatttgttcaa
aaagagttcaaaatcactcttactgatgatgatgatgggcctggtggtgccaggagggaa
agggaattcaaagttgtgatcaaatttgcttcccgtgctgatcttcatcacttggggatg
tttttagaagggaggcaggctgatgccccccaggaggcgctgcaagttttggatattgtg
cttcgtgagttgccgacatctaagtattgtcccgtaggtcgttctttctattctcctaat
ttagggagacggcaaccattgggcgagggtttagagagttggcggggtttctatcaaagc
attcgccccacacaaatgggattatcattgaacattgatatgtcttccacttcattcatc
gagccattgccggtcattgattttgtgacacagcttctgaaccgtgatgtgtcatctaga
ccactgtctgatgctgaccgtgtaaagataaaaaaagcactgagaggtgtgaaggtggag
gttactcatcgtggaaatatgcggcggaagtaccgcattgccaatttaacatctcaagca
acaagagagttaaccttccctgttgatgaaaagggtactttgaaatctgtaattgaatat
tttcgagaaacttatgggtttgtaattcagcatacccagtggccttgtctgcaagttgga
aatcagcagagacctaattacttgccaatggaagtctgcaagattgtagagggacaaagg
tactcaaagcgcttgaatgagaaacagatcactgcacttctgaaagtgacgtgccagcgt
ccccaagatagggagcgtgatattcttgagactgtgaagcataatgcctatgctgaggac
aaatatgccaaggagtttggtattaagattagtgacaagttggcacaagttgaggctcgt
attttgcctccaccttggcttaaatatcatgataatggccgagaaaaagactgcctgcca
caagttggccaatggaacatgatgaacaagaaaatggttaatggaggaacagttgccaat
tggatctgcattaacttttctcgcaatgtgcaagacagtgttgcgcacgggttttgttct
gagcttgcacaaatgtgtggaatatctggaatgaacttcaatccgaatcctgttctgcct
cctacaagtgcacgccctgatcaggttgagagagtcttgaaaactcgatttcatgatgcc
atgacaaagctgcagccgctatcgaaggagctcgatctcctggtcgttatcttgccagac
aataatggatctctttatggtgacctgaaacgaatttgtgagactgagcttggagttgtc
tcacagtgctgtttgacaaaacatgtatttaagatgagcaaacagtatctagccaatgta
gcactgaaaattaatgtgaaggtgggaggaagaaacactgtgctagttgatgcaatatct
aggcgaattccccttgtcagcgaccgtcctacaatcatttttggtgcagatgtcacccat
ccccaccctggagaggactcgagcccatccattgctgcggtggttgcttctcaagattgg
cctgagattacaaagtatgctggtctagtttctgctcaagcccatcggcaagagcttatt
caggatctgtacacgactaggcaagatcctgttaaagggactgtgtctggcggcatgatt
aaggacttacttatctccttccgaagagctactgggcaaaaacctcagagaatcattttc
tacagggatggtgttagtgaagggcaattttatcaagttcttctttatgaacttgatgcg
atccgcaaggcatgtgcatcattggagccaaattatcagcctccagttacatttgttgtg
gttcagaaacgacatcataccagactttttgccaataaccaccgtgacagaaatgcagtt
gaccggagcgggaacattatacctggtactgttgttgactcgaagatttgccacccaaca
gagtttgatttctatctttgtagtcatgctggcatacagggtacgagtcgtccagctcat
taccatgttctatgggacgagaacaagtttacggctgatggactgcagtctttgacaaac
aacctgtgctatacatatgcaaggtgcacacgttcagtctccatcgttcccccggcctat
tatgcacatttggcagcttttcgtgctcgattctatatggagcctgagacatctgacggt
ggatcagtaacaagcggagctgctggcagaggggttggtgcaggagctgctggaaggaac
acacgagcaccaggtgctggtgctgctgttagacctcttcctgctctcaaggataatgtg
aagagggtcatgttctattgctag
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